Conservation of cofitness between CSW01_02825 and CSW01_00065 in Vibrio cholerae E7946 ATCC 55056

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02825 protein-L-isoaspartate O-methyltransferase 1.0 CSW01_00065 DNA replication and repair protein RecF 0.66 1
Pectobacterium carotovorum WPP14 0.68 HER17_RS04340 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.55 HER17_RS00015 DNA replication/repair protein RecF low > 75
Rahnella sp. WP5 0.67 EX31_RS07835 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.55 EX31_RS05975 DNA replication/repair protein RecF low > 89
Klebsiella michiganensis M5al 0.66 BWI76_RS22655 protein-L-isoaspartate O-methyltransferase 0.54 BWI76_RS00010 DNA replication and repair protein RecF low > 92
Dickeya dianthicola 67-19 0.66 HGI48_RS16955 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.55 HGI48_RS00015 DNA replication/repair protein RecF — —
Dickeya dadantii 3937 0.66 DDA3937_RS16885 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.55 DDA3937_RS21285 DNA replication/repair protein RecF low > 74
Dickeya dianthicola ME23 0.66 DZA65_RS18030 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.55 DZA65_RS00015 DNA replication/repair protein RecF low > 75
Serratia liquefaciens MT49 0.66 IAI46_03780 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.56 IAI46_00015 DNA replication/repair protein RecF low > 86
Enterobacter asburiae PDN3 0.65 EX28DRAFT_2839 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.54 EX28DRAFT_3987 DNA replication and repair protein RecF low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4791 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.54 GFF1756 DNA recombination and repair protein RecF low > 78
Escherichia coli ECRC62 0.65 BNILDI_10850 pcm protein-L-isoaspartate O-methyltransferase 0.55 BNILDI_04365 recF DNA replication/repair protein RecF low > 75
Escherichia coli BL21 0.65 ECD_02593 L-isoaspartate protein carboxylmethyltransferase type II 0.55 ECD_03583 gap repair protein low > 61
Escherichia coli ECRC102 0.65 NIAGMN_18255 pcm protein-L-isoaspartate O-methyltransferase 0.55 NIAGMN_12780 recF DNA replication/repair protein RecF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00990 Protein-L-isoaspartate O-methyltransferase 0.55 OHPLBJKB_00003 DNA replication and repair protein RecF low > 73
Escherichia coli ECRC99 0.65 KEDOAH_07655 pcm protein-L-isoaspartate O-methyltransferase 0.55 KEDOAH_13125 recF DNA replication/repair protein RecF — —
Escherichia coli ECRC98 0.65 JDDGAC_24150 pcm protein-L-isoaspartate O-methyltransferase 0.55 JDDGAC_18645 recF DNA replication/repair protein RecF low > 86
Escherichia coli BW25113 0.65 b2743 pcm protein-L-isoaspartate O-methyltransferase (NCBI) 0.55 b3700 recF recombination protein F (NCBI) low > 76
Escherichia coli ECOR27 0.65 NOLOHH_12300 pcm protein-L-isoaspartate O-methyltransferase 0.55 NOLOHH_07165 recF DNA replication/repair protein RecF low > 75
Escherichia coli ECRC100 0.65 OKFHMN_20485 pcm protein-L-isoaspartate O-methyltransferase 0.55 OKFHMN_15025 recF DNA replication/repair protein RecF low > 80
Escherichia fergusonii Becca 0.65 EFB2_01167 Protein-L-isoaspartate O-methyltransferase 0.55 EFB2_00003 DNA replication and repair protein RecF low > 86
Escherichia coli ECRC101 0.65 MCAODC_11010 pcm protein-L-isoaspartate O-methyltransferase 0.55 MCAODC_05535 recF DNA replication/repair protein RecF low > 87
Escherichia coli ECOR38 0.65 HEPCGN_19665 pcm protein-L-isoaspartate O-methyltransferase 0.55 HEPCGN_13720 recF DNA replication/repair protein RecF low > 87
Enterobacter sp. TBS_079 0.65 MPMX20_03629 Protein-L-isoaspartate O-methyltransferase 0.54 MPMX20_00003 DNA replication and repair protein RecF low > 85
Escherichia coli Nissle 1917 0.64 ECOLIN_RS15340 protein-L-isoaspartate O-methyltransferase 0.55 ECOLIN_RS21310 DNA replication/repair protein RecF low > 55
Pantoea sp. MT58 0.63 IAI47_04225 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.56 IAI47_00015 DNA replication/repair protein RecF low > 76
Erwinia amylovora T8 0.63 OLJFJH_09370 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.57 OLJFJH_05150 DNA replication/repair protein RecF low > 58
Alteromonas macleodii MIT1002 0.62 MIT1002_00628 Protein-L-isoaspartate O-methyltransferase 0.35 MIT1002_00003 DNA replication and repair protein RecF low > 70
Erwinia tracheiphila SCR3 0.62 LU632_RS06470 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.55 LU632_RS00015 recF DNA replication/repair protein RecF low > 74
Shewanella loihica PV-4 0.61 Shew_1211 protein-L-isoaspartate O-methyltransferase (RefSeq) 0.46 Shew_0003 DNA replication and repair protein RecF (RefSeq) low > 60
Shewanella sp. ANA-3 0.60 Shewana3_1122 protein-L-isoaspartate O-methyltransferase (RefSeq) 0.45 Shewana3_0011 recF recombination protein F (RefSeq) low > 73
Shewanella amazonensis SB2B 0.59 Sama_1042 protein-L-isoaspartate(D-aspartate) O-methyltransferase (RefSeq) 0.44 Sama_0015 recF recombination protein F (RefSeq) low > 62
Shewanella oneidensis MR-1 0.59 SO3434 pcm protein-L-isoaspartate O-methyltransferase (NCBI ptt file) 0.45 SO0010 recF DNA replication and repair protein RecF (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.54 Psest_2809 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.38 Psest_0004 recF protein low > 67
Pseudomonas fluorescens SBW25 0.54 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.37 PFLU_RS00015 DNA replication/repair protein RecF low > 109
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.37 PFLU_RS00015 DNA replication/repair protein RecF low > 109
Pseudomonas simiae WCS417 0.54 PS417_06355 protein-L-isoaspartate O-methyltransferase 0.37 PS417_00015 recombinase RecF low > 88
Pseudomonas sp. S08-1 0.53 OH686_18175 protein-L-isoaspartate O-methyltransferase 0.38 OH686_12620 DNA recombination and repair protein RecF low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_1372 Protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.38 Psyr_0003 DNA replication and repair protein RecF low > 86
Pseudomonas sp. RS175 0.53 PFR28_00425 Protein-L-isoaspartate O-methyltransferase 0.38 PFR28_04593 DNA replication and repair protein RecF 0.51 25
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_1372 Protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.38 Psyr_0003 DNA replication and repair protein RecF low > 86
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4677 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.37 PfGW456L13_664 DNA recombination and repair protein RecF low > 87
Pseudomonas sp. DMC3 0.53 GFF2082 Protein-L-isoaspartate O-methyltransferase 0.38 GFF578 DNA replication and repair protein RecF low > 89
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_05895 protein-L-isoaspartate O-methyltransferase 0.37 AO356_11635 recombinase RecF low > 104
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_3039 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.36 Pf6N2E2_4197 DNA recombination and repair protein RecF low > 103
Pseudomonas aeruginosa PA14 0.53 IKLFDK_18505 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.38 IKLFDK_25545 DNA replication/repair protein RecF low > 101
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_3113 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.38 Pf1N1B4_1927 DNA recombination and repair protein RecF low > 87
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_16605 protein-L-isoaspartate O-methyltransferase 0.37 AO353_10480 recombinase RecF low > 101
Marinobacter adhaerens HP15 0.52 HP15_1280 protein-L-isoaspartate (D-aspartate) O-methyltransferase 0.29 HP15_3705 DNA replication and repair protein recF low > 73
Pseudomonas sp. SVBP6 0.51 COO64_RS19785 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.37 COO64_RS02120 recF DNA replication/repair protein RecF low > 93
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_2297 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.32 B158DRAFT_0366 DNA replication and repair protein RecF low > 40
Pseudomonas putida KT2440 0.51 PP_1621 Protein-L-isoaspartate O-methyltransferase 0.37 PP_0012 DNA replication and repair protein low > 96
Pseudomonas sp. BP01 0.51 JOY50_RS23745 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.38 JOY50_RS08340 recF DNA replication/repair protein RecF low > 84
Rhodanobacter sp000427505 FW510-R12 0.46 LRK53_RS12265 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.25 LRK53_RS00015 DNA replication/repair protein RecF low > 60
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_08110 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.23 OKGIIK_15255 recF DNA replication/repair protein RecF — —
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS16655 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.25 LRK54_RS08475 DNA replication/repair protein RecF low > 59
Rhodanobacter denitrificans MT42 0.44 LRK55_RS16380 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.25 LRK55_RS08240 DNA replication/repair protein RecF — —
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS06590 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.25 ABZR86_RS15145 DNA replication/repair protein RecF low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.44 A4249_RS04650 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.12 A4249_RS15360 DNA replication/repair protein RecF — —
Azospirillum sp. SherDot2 0.44 MPMX19_01168 Protein-L-isoaspartate O-methyltransferase 0.13 MPMX19_02716 DNA replication and repair protein RecF — —
Rhodospirillum rubrum S1H 0.44 Rru_A1768 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) 0.11 Rru_A0003 RecF protein (NCBI) — —
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.3130.1 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.25 Xcc-8004.4.1 DNA recombination and repair protein RecF low > 74
Magnetospirillum magneticum AMB-1 0.43 AMB_RS12670 protein-L-isoaspartate O-methyltransferase 0.11 AMB_RS03285 DNA replication and repair protein RecF — —
Lysobacter sp. OAE881 0.42 ABIE51_RS06490 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.25 ABIE51_RS00765 DNA replication/repair protein RecF low > 62
Xanthobacter sp. DMC5 0.42 GFF631 Protein-L-isoaspartate O-methyltransferase 0.11 GFF3876 DNA replication and repair protein RecF — —
Azospirillum brasilense Sp245 0.42 AZOBR_RS15455 protein-L-isoaspartate O-methyltransferase 0.11 AZOBR_RS17670 recombinase RecF low > 97
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_06105 protein-L-isoaspartate O-methyltransferase 0.12 CA264_17475 DNA replication and repair protein RecF low > 74
Dinoroseobacter shibae DFL-12 0.39 Dshi_2137 protein-L-isoaspartate O-methyltransferase (RefSeq) 0.12 Dshi_3375 SMC domain protein (RefSeq) — —
Cellulophaga baltica 18 0.38 M666_RS17580 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.15 M666_RS11055 DNA replication and repair protein RecF low > 67
Phaeobacter inhibens DSM 17395 0.38 PGA1_c10760 protein-L-isoaspartate O-methyltransferase Pcm 0.12 PGA1_c00030 DNA replication and repair protein RecF — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_3721 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.14 Echvi_1156 recF protein low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS00725 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.16 ABZR88_RS21650 DNA replication/repair protein RecF — —
Rhodopseudomonas palustris CGA009 0.36 TX73_001955 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.12 TX73_000015 DNA replication/repair protein RecF low > 86
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS10925 protein-L-isoaspartate O-methyltransferase 0.16 CA265_RS24760 DNA replication and repair protein RecF — —
Rhizobium sp. OAE497 0.32 ABIE40_RS08485 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.15 ABIE40_RS00200 DNA replication/repair protein RecF low > 107
Agrobacterium fabrum C58 0.29 Atu1701 protein-L-isoaspartate O-methyltransferase 0.14 Atu0073 recF-like protein low > 89
Bosea sp. OAE506 0.22 ABIE41_RS15020 protein-L-isoaspartate O-methyltransferase 0.14 ABIE41_RS04170 DNA replication/repair protein RecF low > 77
Sphingomonas koreensis DSMZ 15582 0.13 Ga0059261_0639 Protein-L-isoaspartate carboxylmethyltransferase 0.13 Ga0059261_2727 DNA replication and repair protein RecF — —

Not shown: 11 genomes with orthologs for CSW01_02825 only; 13 genomes with orthologs for CSW01_00065 only