Conservation of cofitness between Atu3143 and Atu4541 in Agrobacterium fabrum C58

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3143 hypothetical protein 1.0 Atu4541 carboxymuconolactone decarboxylase 0.27 19
Pseudomonas putida KT2440 0.53 PP_1171 Uronate dehydrogenase (EC 1.1.1.203) (from data) 0.41 PP_1381 4-carboxymuconolactone decarboxylase low > 96
Sinorhizobium meliloti 1021 0.52 SMc04145 hypothetical protein 0.63 SM_b20578 gamma carboxymuconolactone decarboxylase low > 103
Pseudomonas sp. BP01 0.52 JOY50_RS02025 NAD(P)-dependent oxidoreductase 0.42 JOY50_RS14420 pcaC 4-carboxymuconolactone decarboxylase low > 84
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_489 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.41 Pf6N2E2_2829 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) low > 103
Ralstonia solanacearum PSI07 0.52 RPSI07_RS03490 NAD(P)-dependent oxidoreductase 0.44 RPSI07_RS13385 4-carboxymuconolactone decarboxylase low > 81
Pseudomonas sp. RS175 0.51 PFR28_02436 Uronate dehydrogenase 0.41 PFR28_00628 hypothetical protein low > 88
Ralstonia solanacearum GMI1000 0.51 RS_RS21095 NAD(P)-dependent oxidoreductase 0.44 RS_RS11290 4-carboxymuconolactone decarboxylase low > 80
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS20315 NAD(P)-dependent oxidoreductase 0.46 ABZR87_RS15775 4-carboxymuconolactone decarboxylase low > 80
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_23065 NAD-dependent dehydratase 0.41 AO356_04900 4-carboxymuconolactone decarboxylase low > 104
Pseudomonas segetis P6 0.51 ACVTMO_RS20165 NAD-dependent epimerase/dehydratase family protein 0.40 ACVTMO_RS13470 pcaC 4-carboxymuconolactone decarboxylase low > 75
Ralstonia solanacearum UW163 0.51 UW163_RS19450 NAD(P)-dependent oxidoreductase 0.44 UW163_RS09825 4-carboxymuconolactone decarboxylase — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS19725 NAD(P)-dependent oxidoreductase 0.44 RALBFv3_RS03845 4-carboxymuconolactone decarboxylase low > 76
Pseudomonas orientalis W4I3 0.50 QF045_RS19020 NAD(P)-dependent oxidoreductase 0.39 QF045_RS09515 4-carboxymuconolactone decarboxylase low > 93
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_4511 D-galacturonate dehydrogenase (EC 1.1.1.203) (from data) 0.41 Pf1N1B4_3239 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) — —
Pseudomonas sp. DMC3 0.50 GFF1618 Uronate dehydrogenase 0.41 GFF2209 hypothetical protein low > 89
Pseudomonas simiae WCS417 0.50 PS417_17360 D-galacturonate dehydrogenase (EC 1.1.1.203) (from data) 0.40 PS417_06740 4-carboxymuconolactone decarboxylase — —
Pseudomonas fluorescens SBW25 0.50 PFLU_RS19285 NAD(P)-dependent oxidoreductase 0.40 PFLU_RS06765 4-carboxymuconolactone decarboxylase low > 109
Pseudomonas lactucae CFBP13502 0.50 GEMAOFIL_03766 Uronate dehydrogenase 0.40 GEMAOFIL_01508 hypothetical protein low > 96
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS19285 NAD(P)-dependent oxidoreductase 0.40 PFLU_RS06765 4-carboxymuconolactone decarboxylase low > 109
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0902 conserved hypothetical protein 0.41 Psyr_2126 4-carboxymuconolactone decarboxylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0902 conserved hypothetical protein 0.41 Psyr_2126 4-carboxymuconolactone decarboxylase low > 86
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS37710 NAD(P)-dependent oxidoreductase 0.42 QEN71_RS18115 4-carboxymuconolactone decarboxylase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_03826 uronate dehydrogenase 0.41 H281DRAFT_01593 4-carboxymuconolactone decarboxylase — —
Paraburkholderia graminis OAS925 0.48 ABIE53_003986 uronate dehydrogenase 0.41 ABIE53_004273 4-carboxymuconolactone decarboxylase — —
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS24165 NAD-dependent dehydratase 0.40 BPHYT_RS21435 4-carboxymuconolactone decarboxylase — —
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_03260 epimerase 0.41 AO353_17235 4-carboxymuconolactone decarboxylase low > 101
Serratia liquefaciens MT49 0.21 IAI46_00385 NAD(P)-dependent oxidoreductase 0.40 IAI46_12815 4-carboxymuconolactone decarboxylase — —

Not shown: 9 genomes with orthologs for Atu3143 only; 13 genomes with orthologs for Atu4541 only