Conservation of cofitness between Atu3140 and Atu3137 in Agrobacterium fabrum C58

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3140 5-dehydro-4-deoxyglucarate dehydratase 1.0 Atu3137 C4-dicarboxylate-binding protein 0.59 5
Sinorhizobium meliloti 1021 0.65 SMa1440 5-dehydro-4-deoxyglucarate dehydratase 0.58 SM_b21353 periplasmic C4-dicarboxylate transport protein low > 103
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_03816 5-dehydro-4-deoxyglucarate dehydratase 0.47 H281DRAFT_05324 tripartite ATP-independent transporter solute receptor, DctP family low > 103
Paraburkholderia graminis OAS925 0.53 ABIE53_004431 5-dehydro-4-deoxyglucarate dehydratase 0.47 ABIE53_006502 tripartite ATP-independent transporter DctP family solute receptor low > 113
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS20415 5-dehydro-4-deoxyglucarate dehydratase 0.47 BPHYT_RS24175 C4-dicarboxylate ABC transporter low > 109
Pseudomonas segetis P6 0.53 MPMX49_04067 putative 5-dehydro-4-deoxyglucarate dehydratase 0.37 MPMX49_04070 Solute-binding protein — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS11220 5-dehydro-4-deoxyglucarate dehydratase 0.37 PFLU_RS19295 TRAP transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS11220 5-dehydro-4-deoxyglucarate dehydratase 0.37 PFLU_RS19295 TRAP transporter substrate-binding protein 0.40 63
Pseudomonas lactucae CFBP13502 0.52 GEMAOFIL_02430 putative 5-dehydro-4-deoxyglucarate dehydratase 0.37 GEMAOFIL_03768 Solute-binding protein low > 96
Variovorax sp. OAS795 0.52 ABID97_RS10365 5-dehydro-4-deoxyglucarate dehydratase 0.50 ABID97_RS10340 TRAP transporter substrate-binding protein 0.46 10
Acidovorax sp. GW101-3H11 0.52 Ac3H11_336 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) 0.39 Ac3H11_3957 TRAP-type C4-dicarboxylate transport system, periplasmic component low > 79
Variovorax sp. SCN45 0.52 GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) 0.47 GFF2918 TRAP-type C4-dicarboxylate transport system, periplasmic component low > 127
Bosea sp. OAE506 0.52 ABIE41_RS20665 5-dehydro-4-deoxyglucarate dehydratase 0.65 ABIE41_RS07830 TRAP transporter substrate-binding protein low > 77
Azospirillum sp. SherDot2 0.51 MPMX19_02894 putative 5-dehydro-4-deoxyglucarate dehydratase 0.59 MPMX19_05801 Solute-binding protein low > 112
Pseudomonas sp. DMC3 0.51 GFF1798 putative 5-dehydro-4-deoxyglucarate dehydratase 0.38 GFF1616 Solute-binding protein low > 89
Pseudomonas sp. RS175 0.51 PFR28_00142 putative 5-dehydro-4-deoxyglucarate dehydratase 0.37 PFR28_02438 Solute-binding protein 0.95 1
Pseudomonas putida KT2440 0.51 PP_3599 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) 0.38 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) 0.66 3
Pseudomonas sp. BP01 0.51 JOY50_RS07415 kdgD 5-dehydro-4-deoxyglucarate dehydratase 0.37 JOY50_RS02035 TRAP transporter substrate-binding protein — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_07185 5-dehydro-4-deoxyglucarate dehydratase 0.37 AO356_23055 C4-dicarboxylate ABC transporter low > 104
Pseudomonas stutzeri RCH2 0.51 Psest_0374 5-dehydro-4-deoxyglucarate dehydratase 0.38 Psest_0363 tripartite ATP-independent periplasmic transporter solute receptor, DctP family 0.15 51
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_4227 Dihydrodipicolinate synthetase 0.34 Psyr_0900 TRAP dicarboxylate transporter- DctP subunit low > 86
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_3299 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) 0.37 Pf6N2E2_487 TRAP-type C4-dicarboxylate transport system, periplasmic component low > 103
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_4227 Dihydrodipicolinate synthetase 0.34 Psyr_0900 TRAP dicarboxylate transporter- DctP subunit low > 86
Pseudomonas simiae WCS417 0.50 PS417_04195 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) 0.37 PS417_17370 C4-dicarboxylate ABC transporter low > 88
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS20340 5-dehydro-4-deoxyglucarate dehydratase 0.46 ABZR87_RS21090 TRAP transporter substrate-binding protein low > 80
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS15785 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) (from data) 0.23 HSERO_RS04240 C4-dicarboxylate ABC transporter low > 78
Pseudomonas orientalis W4I3 0.50 QF045_RS07190 5-dehydro-4-deoxyglucarate dehydratase 0.38 QF045_RS19030 TRAP transporter substrate-binding protein low > 93
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF792 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) 0.51 GFF797 TRAP-type C4-dicarboxylate transport system, periplasmic component low > 90
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1211.1 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) 0.41 Xcc-8004.201.1 TRAP-type C4-dicarboxylate transport system, periplasmic component low > 74
Rahnella sp. WP5 0.13 EX31_RS17515 dihydrodipicolinate synthase family protein 0.36 EX31_RS08010 TRAP transporter substrate-binding protein low > 89

Not shown: 11 genomes with orthologs for Atu3140 only; 23 genomes with orthologs for Atu3137 only