| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Agrobacterium fabrum C58 | 1.0 | Atu1389 | | ABC transporter, membrane spanning protein | 1.0 | Atu1391 | | ABC transporter, nucleotide binding/ATPase protein | 0.17 | 18 |
| Azospirillum brasilense Sp245 | 0.68 | AZOBR_RS18070 | | polar amino acid ABC transporter permease | 0.83 | AZOBR_RS18060 | | amino acid ABC transporter ATP-binding protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.68 | HSERO_RS21240 | | polar amino acid ABC transporter permease | 0.74 | HSERO_RS21250 | | amino acid ABC transporter ATP-binding protein | low | > 78 |
| Xanthobacter sp. DMC5 | 0.61 | GFF3962 | | L-cystine transport system permease protein YecS | 0.81 | GFF3964 | | Glutamine transport ATP-binding protein GlnQ | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_2212 | | amino acid ABC transporter, permease protein | 0.65 | Pf1N1B4_2210 | | Glutamate transport ATP-binding protein | low | > 87 |
| Cupriavidus basilensis FW507-4G11 | 0.60 | RR42_RS27125 | | polar amino acid ABC transporter permease | 0.71 | RR42_RS27115 | | amino acid ABC transporter ATP-binding protein | low | > 128 |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_878 | | amino acid ABC transporter, permease protein | 0.65 | PfGW456L13_876 | | Glutamate transport ATP-binding protein | low | > 87 |
| Pseudomonas sp. DMC3 | 0.60 | GFF332 | | L-cystine transport system permease protein YecS | 0.65 | GFF334 | | Glutamine transport ATP-binding protein GlnQ | low | > 89 |
| Pseudomonas syringae pv. syringae B728a | 0.60 | Psyr_0297 | | amino acid ABC transporter membrane protein 1, PAAT family | 0.66 | Psyr_0295 | | amino acid ABC transporter ATP-binding protein, PAAT family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.60 | Psyr_0297 | | amino acid ABC transporter membrane protein 1, PAAT family | 0.66 | Psyr_0295 | | amino acid ABC transporter ATP-binding protein, PAAT family | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_08865 | | ABC transporter permease | 0.65 | AO353_08875 | | amino acid ABC transporter ATP-binding protein | low | > 101 |
| Variovorax sp. SCN45 | 0.59 | GFF6799 | | ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) | 0.69 | GFF6797 | | Glutamine ABC transporter, ATP-binding protein GlnQ | low | > 127 |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_4457 | | amino acid ABC transporter, permease protein | 0.65 | Pf6N2E2_4455 | | Glutamate transport ATP-binding protein | low | > 103 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS29055 | | amino acid ABC transporter permease | 0.65 | PFLU_RS29065 | | amino acid ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_27390 | | ABC transporter permease | 0.64 | PS417_27400 | | amino acid ABC transporter ATP-binding protein | — | — |
| Pseudomonas orientalis W4I3 | 0.59 | QF045_RS01760 | | amino acid ABC transporter permease | 0.65 | QF045_RS01770 | | amino acid ABC transporter ATP-binding protein | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS29055 | | amino acid ABC transporter permease | 0.65 | PFLU_RS29065 | | amino acid ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas sp. RS175 | 0.58 | PFR28_04341 | | L-cystine transport system permease protein YecS | 0.65 | PFR28_04343 | | Glutamine transport ATP-binding protein GlnQ | low | > 88 |
| Variovorax sp. OAS795 | 0.57 | ABID97_RS21110 | | amino acid ABC transporter permease | 0.68 | ABID97_RS21120 | | amino acid ABC transporter ATP-binding protein | low | > 91 |
| Azospirillum sp. SherDot2 | 0.56 | MPMX19_05395 | | L-cystine transport system permease protein TcyB | 0.62 | MPMX19_05397 | | Glutamine transport ATP-binding protein GlnQ | — | — |
| Pseudomonas lactucae CFBP13502 | 0.56 | GEMAOFIL_05614 | | L-cystine transport system permease protein YecS | 0.66 | GEMAOFIL_05616 | | Glutamine transport ATP-binding protein GlnQ | low | > 96 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_12915 | | ABC transporter permease | 0.65 | AO356_12905 | | amino acid ABC transporter ATP-binding protein | low | > 104 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.53 | H281DRAFT_05403 | | amino acid ABC transporter membrane protein 1, PAAT family | 0.54 | H281DRAFT_02573 | | amino acid ABC transporter ATP-binding protein, PAAT family | low | > 103 |
| Ralstonia solanacearum GMI1000 | 0.51 | RS_RS10555 | | amino acid ABC transporter permease | 0.64 | RS_RS10565 | | amino acid ABC transporter ATP-binding protein | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_4901 | | amino acid ABC transporter, permease protein | 0.66 | Ac3H11_4899 | | ABC transporter ATP-binding protein | low | > 79 |
| Ralstonia sp. UNC404CL21Col | 0.49 | ABZR87_RS05460 | | amino acid ABC transporter permease | 0.64 | ABZR87_RS05470 | | amino acid ABC transporter ATP-binding protein | low | > 80 |
Not shown: 16 genomes with orthologs for Atu1389 only; 0 genomes with orthologs for Atu1391 only