Conservation of cofitness between Atu2364 and Atu0135 in Agrobacterium fabrum C58

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2364 ABC transporter, membrane spanning protein 1.0 Atu0135 uracil phosphoribosyltransferase 0.20 3
Phaeobacter inhibens DSM 17395 0.57 PGA1_262p02370 putative histidine transport system permease protein HisQ 0.73 PGA1_c11960 uracil phosphoribosyltransferase Upp low > 62
Sinorhizobium meliloti 1021 0.56 SMc02258 ABC transporter permease 0.89 SMc04121 uracil phosphoribosyltransferase low > 103
Pseudomonas simiae WCS417 0.49 PS417_13555 ABC transporter permease 0.50 PS417_04435 uracil phosphoribosyltransferase 0.14 79
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_28140 ABC transporter permease 0.51 AO353_14855 uracil phosphoribosyltransferase low > 101
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS29650 histidine ABC transporter permease 0.66 RR42_RS30815 uracil phosphoribosyltransferase low > 128
Escherichia coli ECRC100 0.39 OKFHMN_22735 hisQ histidine ABC transporter permease HisQ 0.52 OKFHMN_21815 upp uracil phosphoribosyltransferase low > 79
Escherichia coli ECRC98 0.39 JDDGAC_26695 hisQ histidine ABC transporter permease HisQ 0.52 JDDGAC_25760 upp uracil phosphoribosyltransferase low > 87
Escherichia coli ECRC102 0.39 NIAGMN_20505 hisQ histidine ABC transporter permease HisQ 0.52 NIAGMN_19585 upp uracil phosphoribosyltransferase low > 80
Escherichia coli ECRC99 0.39 KEDOAH_05460 hisQ histidine ABC transporter permease HisQ 0.52 KEDOAH_06405 upp uracil phosphoribosyltransferase
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0296 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.52 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) low > 76
Enterobacter sp. TBS_079 0.39 MPMX20_03243 Histidine transport system permease protein HisQ 0.53 MPMX20_03352 Uracil phosphoribosyltransferase low > 85
Klebsiella michiganensis M5al 0.39 BWI76_RS20330 histidine/lysine/arginine/ornithine ABC transporter permease HisQ 0.52 BWI76_RS20945 uracil phosphoribosyltransferase low > 92
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_06474 amino acid ABC transporter membrane protein 1, PAAT family 0.54 H281DRAFT_04523 uracil phosphoribosyltransferase low > 103
Escherichia coli ECOR38 0.39 HEPCGN_21930 hisQ histidine ABC transporter permease HisQ 0.52 HEPCGN_20980 upp uracil phosphoribosyltransferase 0.36 58
Escherichia coli ECRC62 0.39 BNILDI_13275 hisQ histidine ABC transporter permease HisQ 0.52 BNILDI_12275 upp uracil phosphoribosyltransferase low > 75
Escherichia coli ECOR27 0.39 NOLOHH_14355 hisQ histidine ABC transporter permease HisQ 0.52 NOLOHH_13465 upp uracil phosphoribosyltransferase low > 76
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS23395 histidine ABC transporter permease HisQ 0.55 QEN71_RS24390 uracil phosphoribosyltransferase low > 153
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_01397 Histidine transport system permease protein HisQ 0.52 OHPLBJKB_01228 Uracil phosphoribosyltransferase low > 74
Escherichia fergusonii Becca 0.39 EFB2_01550 Histidine transport system permease protein HisQ 0.52 EFB2_01400 Uracil phosphoribosyltransferase low > 86
Acinetobacter baumannii LAC-4 0.39 RR41_RS06085 histidine ABC transporter permease HisQ 0.49 RR41_RS15445 uracil phosphoribosyltransferase low > 55
Klebsiella pneumoniae MKP103 0.39 KDGMDA_27165 amino acid ABC transporter permease 0.52 KDGMDA_27790 uracil phosphoribosyltransferase low > 95
Serratia liquefaciens MT49 0.39 IAI46_17795 histidine ABC transporter permease HisQ 0.53 IAI46_18880 uracil phosphoribosyltransferase low > 87
Escherichia coli Nissle 1917 0.39 ECOLIN_RS13385 histidine ABC transporter permease HisQ 0.52 ECOLIN_RS14185 uracil phosphoribosyltransferase
Escherichia coli ECRC101 0.39 MCAODC_13775 hisQ histidine ABC transporter permease HisQ 0.52 MCAODC_12345 upp uracil phosphoribosyltransferase low > 87
Escherichia coli BW25113 0.38 b2308 hisQ histidine/lysine/arginine/ornithine transporter subunit (NCBI) 0.52 b2498 upp uracil phosphoribosyltransferase (VIMSS) low > 76
Escherichia coli BL21 0.38 ECD_02233 histidine ABC transporter permease 0.52 ECD_02390 uracil phosphoribosyltransferase low > 61
Pseudomonas aeruginosa PA14 0.38 IKLFDK_14855 histidine ABC transporter permease 0.49 IKLFDK_00265 uracil phosphoribosyltransferase low > 98
Pseudomonas aeruginosa MRSN321 0.38 DY961_RS02370 ABC transporter permease 0.49 DY961_RS29060 upp;go_function=uracil uracil phosphoribosyltransferase low > 100
Erwinia amylovora T8 0.38 OLJFJH_11295 amino acid ABC transporter permease 0.52 OLJFJH_10595 uracil phosphoribosyltransferase low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF1917 Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) 0.52 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 78
Pseudomonas aeruginosa PUPa3 0.38 DQ20_RS33220 ABC transporter permease 0.49 DQ20_RS55635 upp;go_function=uracil uracil phosphoribosyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1965 Arginine/ornithine ABC transporter, permease protein AotQ 0.50 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 87
Pseudomonas sp. DMC3 0.37 GFF4885 Histidine transport system permease protein HisQ 0.50 GFF4471 Uracil phosphoribosyltransferase low > 89
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS23345 ABC transporter permease 0.51 PFLU_RS04485 uracil phosphoribosyltransferase 0.51 33
Pseudomonas orientalis W4I3 0.37 QF045_RS23845 ABC transporter permease 0.50 QF045_RS07420 uracil phosphoribosyltransferase low > 93
Pseudomonas fluorescens SBW25 0.37 PFLU_RS23345 ABC transporter permease 0.51 PFLU_RS04485 uracil phosphoribosyltransferase 0.84 18
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_18705 L-Arginine ABC transporter, permease component 2 (from data) 0.52 AO356_16565 uracil phosphoribosyltransferase low > 104
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_04490 Histidine transport system permease protein HisQ 0.51 GEMAOFIL_01092 Uracil phosphoribosyltransferase low > 96
Pantoea sp. MT58 0.37 IAI47_06290 histidine ABC transporter permease HisQ 0.53 IAI47_05185 uracil phosphoribosyltransferase low > 76
Pseudomonas sp. SVBP6 0.37 COO64_RS21635 ABC transporter permease 0.51 COO64_RS03295 upp uracil phosphoribosyltransferase low > 93
Pantoea agglomerans CFBP13505 P0401 0.37 PagCFBP13505_RS00245 ABC transporter permease subunit 0.52 PagCFBP13505_RS15075 uracil phosphoribosyltransferase low > 74
Rahnella sp. WP5 0.37 EX31_RS19555 ABC transporter permease subunit 0.52 EX31_RS22700 uracil phosphoribosyltransferase low > 89
Pseudomonas putida KT2440 0.37 PP_4485 histidine / lysine / arginine / ornithine ABC transporter - permease subunit 0.50 PP_0746 Uracil phosphoribosyltransferase low > 96
Dickeya dadantii 3937 0.36 DDA3937_RS14420 histidine ABC transporter permease HisQ 0.52 DDA3937_RS06030 uracil phosphoribosyltransferase low > 74
Dickeya dianthicola ME23 0.36 DZA65_RS15320 ABC transporter permease subunit 0.52 DZA65_RS06425 uracil phosphoribosyltransferase low > 75
Dickeya dianthicola 67-19 0.36 HGI48_RS14390 histidine ABC transporter permease HisQ 0.52 HGI48_RS06075 uracil phosphoribosyltransferase low > 71
Pseudomonas sp. BP01 0.35 JOY50_RS01000 ABC transporter permease 0.51 JOY50_RS19525 upp uracil phosphoribosyltransferase low > 84
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS07675 ABC transporter for L-Arginine, permease component 2 (from data) 0.55 BPHYT_RS06415 uracil phosphoribosyltransferase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4692 Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) 0.67 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 90
Castellaniella sp019104865 MT123 0.34 ABCV34_RS02180 ABC transporter permease 0.51 ABCV34_RS15380 uracil phosphoribosyltransferase low > 48

Not shown: 0 genomes with orthologs for Atu2364 only; 65 genomes with orthologs for Atu0135 only