Conservation of cofitness between Sama_3073 and Sama_2174 in Shewanella amazonensis SB2B

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_3073 serine protease (RefSeq) 1.0 Sama_2174 hypothetical protein (RefSeq) 0.42 19
Shewanella sp. ANA-3 0.81 Shewana3_0690 peptidase Do (RefSeq) 0.45 Shewana3_1454 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.80 SO3942 serine protease, HtrA/DegQ/DegS family (NCBI ptt file) 0.46 SO3095 conserved hypothetical protein (NCBI ptt file) — —
Shewanella loihica PV-4 0.77 Shew_3296 protease Do (RefSeq) 0.42 Shew_2432 hypothetical protein (RefSeq) 0.37 46
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS17545 DegQ family serine endoprotease 0.14 ABZR86_RS11760 BatD family protein low > 74
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.4948.1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 0.10 Xcc-8004.1183.1 BatD low > 74
Rhodanobacter sp000427505 FW510-R12 0.39 LRK53_RS17720 Do family serine endopeptidase 0.13 LRK53_RS16655 BatD family protein low > 59
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS06430 Do family serine endopeptidase 0.13 LRK54_RS11885 BatD family protein low > 59
Rhodanobacter denitrificans MT42 0.38 LRK55_RS06175 Do family serine endopeptidase 0.12 LRK55_RS11610 BatD family protein low > 63
Lysobacter sp. OAE881 0.38 ABIE51_RS03265 trypsin-like peptidase domain-containing protein 0.10 ABIE51_RS17135 BatD family protein low > 62
Pseudomonas sp. SVBP6 0.31 COO64_RS16540 DegQ family serine endoprotease 0.13 COO64_RS05445 BatD family protein low > 93
Pseudomonas simiae WCS417 0.31 PS417_07135 serine peptidase 0.14 PS417_15110 protein BatD — —
Pseudomonas fluorescens SBW25 0.31 PFLU_RS07245 DegQ family serine endoprotease 0.14 PFLU_RS17130 protein BatD low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS07245 DegQ family serine endoprotease 0.14 PFLU_RS17130 protein BatD low > 109
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_2753 HtrA protease/chaperone protein 0.14 Pf6N2E2_620 BatD low > 103
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_04560 serine peptidase 0.14 AO356_24640 protein BatD 0.35 36
Pseudomonas sp. BP01 0.31 JOY50_RS14680 DegQ family serine endoprotease 0.14 JOY50_RS16425 BatD family protein low > 84
Pseudomonas segetis P6 0.31 MPMX49_01404 Periplasmic serine endoprotease DegP 0.14 MPMX49_03036 hypothetical protein 0.58 14
Pseudomonas lactucae CFBP13502 0.31 GEMAOFIL_01575 Periplasmic serine endoprotease DegP 0.13 GEMAOFIL_03322 hypothetical protein low > 93
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_3326 HtrA protease/chaperone protein 0.14 Pf1N1B4_4634 BatD — —
Pseudomonas putida KT2440 0.31 PP_1430 putative periplasmic serine endoprotease DegP-like 0.15 PP_2027 conserved exported protein of unknown function low > 96
Pseudomonas sp. DMC3 0.30 GFF2280 Periplasmic serine endoprotease DegP 0.14 GFF3020 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_17640 serine peptidase 0.15 AO353_23710 protein BatD low > 101
Pseudomonas sp. S08-1 0.30 OH686_20060 HtrA protease/chaperone protein 0.13 OH686_22230 Aerotolerance protein BatD low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_3955 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.14 Psyr_1716 conserved hypothetical protein low > 86
Pseudomonas aeruginosa PA14 0.30 IKLFDK_03285 serine protease MucD 0.13 IKLFDK_15630 BatD superfamily protein low > 100
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_3955 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.14 Psyr_1716 conserved hypothetical protein low > 86
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_4513 HtrA protease/chaperone protein 0.15 PfGW456L13_3305 BatD low > 87
Pseudomonas sp. RS175 0.30 PFR28_00693 Periplasmic serine endoprotease DegP 0.14 PFR28_01590 hypothetical protein low > 88
Pseudomonas stutzeri RCH2 0.30 Psest_3096 periplasmic serine protease, Do/DeqQ family 0.14 Psest_1938 hypothetical protein — —
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_2183 periplasmic serine protease, Do/DeqQ family 0.11 B158DRAFT_1001 hypothetical protein low > 40

Not shown: 58 genomes with orthologs for Sama_3073 only; 0 genomes with orthologs for Sama_2174 only