Conservation of cofitness between Sama_2200 and Sama_1542 in Shewanella amazonensis SB2B

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_2200 serine/threonine transporter SstT (RefSeq) 1.0 Sama_1542 response regulator receiver protein (RefSeq) 0.43 11
Shewanella sp. ANA-3 0.83 Shewana3_1426 serine/threonine transporter SstT (RefSeq) 0.90 Shewana3_1724 two component transcriptional regulator (RefSeq) low > 73
Shewanella loihica PV-4 0.83 Shew_1458 serine/threonine transporter SstT (RefSeq) 0.91 Shew_2348 two component transcriptional regulator (RefSeq) — —
Shewanella oneidensis MR-1 0.81 SO3122 sodium/dicarboxylate symporter (NCBI ptt file) 0.89 SO1946 phoP transcriptional regulatory protein PhoP (NCBI ptt file) low > 76
Pseudomonas aeruginosa PA14 0.72 IKLFDK_09990 serine/threonine transporter SstT 0.53 IKLFDK_05465 two-component system response regulator PhoP low > 100
Pectobacterium carotovorum WPP14 0.67 HER17_RS18695 serine/threonine transporter SstT 0.46 HER17_RS11640 two-component system response regulator PhoP low > 75
Pseudomonas sp. SVBP6 0.67 COO64_RS10250 sstT serine/threonine transporter SstT 0.54 COO64_RS07420 response regulator low > 93
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_2541 Sodium:dicarboxylate symporter 0.55 PfGW456L13_2011 Transcriptional regulatory protein PhoP low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF3191 Sodium:dicarboxylate symporter 0.47 GFF3415 Transcriptional regulatory protein PhoP low > 78
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3934 Sodium:dicarboxylate symporter 0.54 Pf1N1B4_3483 Transcriptional regulatory protein PhoP low > 87
Pseudomonas sp. RS175 0.66 PFR28_01214 Serine/threonine transporter SstT 0.54 PFR28_03244 Transcriptional regulatory protein PhoP low > 88
Serratia liquefaciens MT49 0.66 IAI46_22210 serine/threonine transporter SstT 0.46 IAI46_10395 two-component system response regulator PhoP low > 86
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_01815 serine/threonine protein kinase 0.54 AO356_18965 transcriptional regulator low > 104
Klebsiella michiganensis M5al 0.66 BWI76_RS24715 serine/threonine transporter SstT 0.47 BWI76_RS11280 two-component system response regulator PhoP — —
Klebsiella pneumoniae MKP103 0.66 KDGMDA_05580 serine/threonine transporter SstT 0.46 KDGMDA_18880 two-component system response regulator PhoP low > 95
Enterobacter sp. TBS_079 0.66 MPMX20_03999 Serine/threonine transporter SstT 0.47 MPMX20_01811 Transcriptional regulatory protein PhoP low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3158 Na+/serine symporter 0.47 EX28DRAFT_1800 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Pseudomonas sp. DMC3 0.66 GFF1431 Serine/threonine transporter SstT 0.54 GFF4840 Virulence transcriptional regulatory protein PhoP low > 89
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_20105 serine/threonine protein kinase 0.53 AO353_02815 transcriptional regulator low > 101
Escherichia coli BW25113 0.65 b3089 sstT sodium:serine/threonine symporter (NCBI) 0.46 b1130 phoP DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) low > 76
Escherichia coli ECRC102 0.65 NIAGMN_16300 sstT serine/threonine transporter SstT 0.47 NIAGMN_24875 phoP two-component system response regulator PhoP low > 80
Escherichia coli BL21 0.65 ECD_02958 sodium:serine/threonine symporter 0.46 ECD_01128 response regulator in two-component regulatory system with PhoQ — —
Escherichia coli ECRC62 0.65 BNILDI_01180 sstT serine/threonine transporter SstT 0.46 BNILDI_19080 phoP two-component system response regulator PhoP low > 75
Escherichia coli ECRC101 0.65 MCAODC_09050 sstT serine/threonine transporter SstT 0.47 MCAODC_22355 phoP two-component system response regulator PhoP low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00613 Serine/threonine transporter SstT 0.46 OHPLBJKB_02538 Transcriptional regulatory protein PhoP low > 74
Escherichia coli ECRC98 0.65 JDDGAC_22170 sstT serine/threonine transporter SstT 0.47 JDDGAC_06635 phoP two-component system response regulator PhoP low > 87
Escherichia coli ECRC100 0.65 OKFHMN_18535 sstT serine/threonine transporter SstT 0.47 OKFHMN_00730 phoP two-component system response regulator PhoP low > 79
Escherichia coli ECOR38 0.65 HEPCGN_17390 sstT serine/threonine transporter SstT 0.46 HEPCGN_24200 phoP two-component system response regulator PhoP low > 88
Escherichia coli ECRC99 0.65 KEDOAH_09610 sstT serine/threonine transporter SstT 0.47 KEDOAH_24815 phoP two-component system response regulator PhoP — —
Escherichia coli ECOR27 0.65 NOLOHH_10335 sstT serine/threonine transporter SstT 0.46 NOLOHH_20915 phoP two-component system response regulator PhoP low > 76
Escherichia fergusonii Becca 0.65 EFB2_00723 Serine/threonine transporter SstT 0.46 EFB2_02845 Transcriptional regulatory protein PhoP low > 86
Escherichia coli Nissle 1917 0.65 ECOLIN_RS17815 serine/threonine transporter SstT 0.46 ECOLIN_RS06610 two-component system response regulator PhoP — —
Pseudomonas sp. BP01 0.65 JOY50_RS04145 sstT serine/threonine transporter SstT 0.57 JOY50_RS01975 response regulator low > 84
Pseudomonas lactucae CFBP13502 0.65 GEMAOFIL_02177 Serine/threonine transporter SstT 0.53 GEMAOFIL_04447 Virulence transcriptional regulatory protein PhoP low > 93
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_2230 Sodium:dicarboxylate symporter 0.55 Pf6N2E2_5704 Transcriptional regulatory protein PhoP low > 103
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS11535 serine/threonine transporter SstT 0.45 PagCFBP13505_RS19455 two-component system response regulator PhoP low > 74
Pantoea sp. MT58 0.64 IAI47_02925 serine/threonine transporter SstT 0.45 IAI47_11930 two-component system response regulator PhoP low > 76
Pseudomonas stutzeri RCH2 0.64 Psest_2478 Na+/serine symporter 0.49 Psest_3883 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 67
Pseudomonas simiae WCS417 0.64 PS417_10435 serine/threonine protein kinase 0.53 PS417_21515 transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.63 PFLU_RS10520 serine/threonine transporter SstT 0.50 PFLU_RS23130 response regulator transcription factor low > 109
Pseudomonas putida KT2440 0.63 PP_2443 Serine/threonine transporter SstT 0.57 PP_1186 two component system DNA-binding transcriptional dual regulator low > 96
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS10520 serine/threonine transporter SstT 0.50 PFLU_RS23130 response regulator transcription factor low > 109
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_06600 sstT serine/threonine transporter SstT 0.47 IJEDHG_00380 phoP two-component system response regulator PhoP low > 61
Erwinia tracheiphila SCR3 0.62 LU632_RS02310 sstT serine/threonine transporter SstT 0.47 LU632_RS14590 phoP two-component system response regulator PhoP low > 74
Erwinia amylovora T8 0.59 OLJFJH_02205 serine/threonine transporter SstT 0.48 OLJFJH_15270 two-component system response regulator PhoP low > 58

Not shown: 6 genomes with orthologs for Sama_2200 only; 12 genomes with orthologs for Sama_1542 only