Conservation of cofitness between Shew_2497 and Shew_2494 in Shewanella loihica PV-4

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2497 sigma-54 dependent trancsriptional regulator (RefSeq) 1.0 Shew_2494 phage shock protein C, PspC (RefSeq) 0.87 4
Shewanella sp. ANA-3 0.79 Shewana3_2649 Fis family transcriptional regulator (RefSeq) 0.71 Shewana3_2646 phage shock protein C, PspC (RefSeq) low > 73
Shewanella oneidensis MR-1 0.79 SO1806 pspF psp operon transcriptional activator (NCBI ptt file) 0.73 SO1809 pspC phage shock protein C (NCBI ptt file) 0.49 3
Shewanella amazonensis SB2B 0.76 Sama_1236 psp operon transcriptional activator (RefSeq) 0.76 Sama_1239 phage shock protein C (RefSeq) 0.82 1
Alteromonas macleodii MIT1002 0.64 MIT1002_01142 Phage shock protein F 0.44 MIT1002_01145 Phage shock protein C 0.81 34
Pantoea agglomerans CFBP13505 P0401 0.58 PagCFBP13505_RS06760 phage shock protein operon transcriptional activator 0.26 PagCFBP13505_RS06745 envelope stress response membrane protein PspC low > 74
Serratia liquefaciens MT49 0.58 IAI46_13505 phage shock protein operon transcriptional activator 0.26 IAI46_13490 envelope stress response membrane protein PspC — —
Escherichia coli BW25113 0.57 b1303 pspF psp operon transcriptional activator (VIMSS) 0.26 b1306 pspC DNA-binding transcriptional activator (NCBI) low > 76
Escherichia coli BL21 0.57 ECD_01280 psp operon transcriptional activator 0.26 ECD_01283 psp operon transcription co-activator — —
Escherichia fergusonii Becca 0.57 EFB2_02624 Psp operon transcriptional activator 0.26 EFB2_02621 Phage shock protein C low > 86
Escherichia coli ECOR38 0.57 HEPCGN_25785 pspF phage shock protein operon transcriptional activator 0.26 HEPCGN_25800 pspC envelope stress response membrane protein PspC low > 88
Escherichia coli ECRC102 0.57 NIAGMN_26585 pspF phage shock protein operon transcriptional activator 0.26 NIAGMN_26570 pspC envelope stress response membrane protein PspC — —
Escherichia coli ECRC99 0.57 KEDOAH_26360 pspF phage shock protein operon transcriptional activator 0.26 KEDOAH_26375 pspC envelope stress response membrane protein PspC — —
Escherichia coli ECRC101 0.57 MCAODC_15855 pspF phage shock protein operon transcriptional activator 0.26 MCAODC_15870 pspC envelope stress response membrane protein PspC low > 87
Escherichia coli ECRC100 0.57 OKFHMN_02415 pspF phage shock protein operon transcriptional activator 0.26 OKFHMN_02400 pspC envelope stress response membrane protein PspC — —
Escherichia coli ECRC98 0.57 JDDGAC_04960 pspF phage shock protein operon transcriptional activator 0.26 JDDGAC_04945 pspC envelope stress response membrane protein PspC low > 87
Escherichia coli ECOR27 0.57 NOLOHH_20100 pspF phage shock protein operon transcriptional activator 0.26 NOLOHH_20085 pspC envelope stress response membrane protein PspC low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02379 Psp operon transcriptional activator 0.26 OHPLBJKB_02376 Phage shock protein C 0.34 10
Escherichia coli Nissle 1917 0.57 ECOLIN_RS07845 phage shock protein operon transcriptional activator 0.26 ECOLIN_RS07860 envelope stress response membrane protein PspC — —
Escherichia coli ECRC62 0.57 BNILDI_18250 pspF phage shock protein operon transcriptional activator 0.26 BNILDI_18235 pspC envelope stress response membrane protein PspC low > 75
Enterobacter sp. TBS_079 0.56 MPMX20_02473 Psp operon transcriptional activator 0.26 MPMX20_02470 Phage shock protein C low > 85
Dickeya dianthicola ME23 0.56 DZA65_RS12950 phage shock protein operon transcriptional activator 0.24 DZA65_RS12935 envelope stress response membrane protein PspC low > 75
Klebsiella michiganensis M5al 0.56 BWI76_RS12445 phage shock protein operon transcriptional activator 0.24 BWI76_RS12460 envelope stress response membrane protein PspC low > 92
Klebsiella pneumoniae MKP103 0.56 KDGMDA_19915 phage shock protein operon transcriptional activator 0.23 KDGMDA_19930 envelope stress response membrane protein PspC low > 95
Dickeya dianthicola 67-19 0.56 HGI48_RS12500 phage shock protein operon transcriptional activator 0.23 HGI48_RS12485 envelope stress response membrane protein PspC low > 71
Enterobacter asburiae PDN3 0.56 EX28DRAFT_0975 psp operon transcriptional activator PspF 0.27 EX28DRAFT_0978 phage shock protein C (PspC) family protein low > 76
Pantoea sp. MT58 0.56 IAI47_09390 phage shock protein operon transcriptional activator 0.25 IAI47_09405 envelope stress response membrane protein PspC 0.73 4
Dickeya dadantii 3937 0.56 DDA3937_RS12430 phage shock protein operon transcriptional activator 0.27 DDA3937_RS12415 envelope stress response membrane protein PspC low > 74
Pectobacterium carotovorum WPP14 0.56 HER17_RS09515 phage shock protein operon transcriptional activator 0.27 HER17_RS09530 envelope stress response membrane protein PspC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF2687 Psp operon transcriptional activator 0.25 GFF2684 Phage shock protein C low > 78
Erwinia amylovora T8 0.55 OLJFJH_13670 phage shock protein operon transcriptional activator 0.24 OLJFJH_13685 envelope stress response membrane protein PspC low > 58
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_08440 phage shock protein operon transcriptional activator 0.35 CSW01_08425 envelope stress response membrane protein PspC low > 62
Rahnella sp. WP5 0.55 EX31_RS15690 phage shock protein operon transcriptional activator 0.23 EX31_RS15675 envelope stress response membrane protein PspC low > 89
Erwinia tracheiphila SCR3 0.55 LU632_RS11565 pspF phage shock protein operon transcriptional activator 0.28 LU632_RS11550 pspC envelope stress response membrane protein PspC low > 73
Erwinia tracheiphila HP pepo 2.2 0.55 IJEDHG_23015 pspF phage shock protein operon transcriptional activator 0.28 IJEDHG_23030 pspC envelope stress response membrane protein PspC low > 61
Azospirillum sp. SherDot2 0.55 MPMX19_02138 Psp operon transcriptional activator 0.25 MPMX19_02134 Phage shock protein C 0.87 14
Azospirillum brasilense Sp245 0.54 AZOBR_RS02540 ATPase AAA 0.28 AZOBR_RS02555 transcriptional regulator low > 97
Sphingobium sp. HT1-2 0.50 GFF989 Psp operon transcriptional activator 0.21 GFF985 Phage shock protein C low > 95

Not shown: 4 genomes with orthologs for Shew_2497 only; 0 genomes with orthologs for Shew_2494 only