Conservation of cofitness between Shew_2061 and Shew_2106 in Shewanella loihica PV-4

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2061 radical SAM domain-containing protein (RefSeq) 1.0 Shew_2106 hypothetical protein (RefSeq) 0.48 7
Shewanella sp. ANA-3 0.76 Shewana3_2163 radical activating enzyme (RefSeq) 0.55 Shewana3_2321 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.75 SO2501 radical activating enzyme (NCBI ptt file) 0.54 SO2533 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.73 Sama_1825 radical activating enzyme (RefSeq) 0.42 Sama_1868 hypothetical protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_01264 7-carboxy-7-deazaguanine synthase 0.18 MIT1002_02221 hypothetical protein low > 70
Pseudomonas sp. DMC3 0.19 GFF5176 7-carboxy-7-deazaguanine synthase 0.16 GFF2537 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_03540 7-carboxy-7-deazaguanine synthase 0.15 AO353_02690 dehydrogenase low > 101
Pseudomonas simiae WCS417 0.18 PS417_22405 7-carboxy-7-deazaguanine synthase 0.13 PS417_20130 dehydrogenase low > 88
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE 0.12 PFLU_RS22075 DUF3108 domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.18 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE 0.12 PFLU_RS22075 DUF3108 domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_629 Queuosine Biosynthesis QueE Radical SAM 0.17 Pf1N1B4_3696 FIG00955360: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_5545 Queuosine Biosynthesis QueE Radical SAM 0.17 Pf6N2E2_5727 FIG00955360: hypothetical protein low > 103
Pseudomonas sp. RS175 0.17 PFR28_03404 7-carboxy-7-deazaguanine synthase 0.16 PFR28_03219 hypothetical protein 0.21 37
Pseudomonas lactucae CFBP13502 0.17 GEMAOFIL_04633 7-carboxy-7-deazaguanine synthase 0.12 GEMAOFIL_04219 hypothetical protein low > 93
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_18065 7-carboxy-7-deazaguanine synthase 0.16 AO356_19080 dehydrogenase low > 104
Pseudomonas aeruginosa PA14 0.17 IKLFDK_04415 7-carboxy-7-deazaguanine synthase QueE 0.16 IKLFDK_04250 DUF3108 domain-containing protein low > 100
Pseudomonas sp. S08-1 0.17 OH686_19175 7-carboxy-7-deazaguanine synthase 0.18 OH686_18985 hypothetical protein low > 80
Pseudomonas putida KT2440 0.17 PP_1225 7-carboxy-7-deazaguanine synthase 0.14 PP_1663 conserved exported protein of unknown function low > 96
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_1861 Queuosine Biosynthesis QueE Radical SAM 0.16 PfGW456L13_4254 FIG00955360: hypothetical protein low > 87
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.1449.1 Queuosine Biosynthesis QueE Radical SAM 0.11 Xcc-8004.1671.1 FIG01211114: hypothetical protein low > 74
Pseudomonas sp. SVBP6 0.16 COO64_RS20140 queE 7-carboxy-7-deazaguanine synthase QueE 0.14 COO64_RS07305 DUF3108 domain-containing protein low > 93
Pseudomonas sp. BP01 0.16 JOY50_RS01775 queE 7-carboxy-7-deazaguanine synthase QueE 0.14 JOY50_RS23930 DUF3108 domain-containing protein low > 84

Not shown: 74 genomes with orthologs for Shew_2061 only; 6 genomes with orthologs for Shew_2106 only