Conservation of cofitness between Shew_1910 and Shew_1931 in Shewanella loihica PV-4

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_1910 bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq) 1.0 Shew_1931 alkylphosphonate utilization operon protein PhnA (RefSeq) 0.28 18
Serratia liquefaciens MT49 0.78 IAI46_14220 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 IAI46_06020 phnA family protein low > 87
Pectobacterium carotovorum WPP14 0.78 HER17_RS11030 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.53 HER17_RS16190 alkylphosphonate utilization protein low > 75
Rahnella sp. WP5 0.77 EX31_RS10075 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.57 EX31_RS19010 alkylphosphonate utilization protein low > 89
Pantoea sp. MT58 0.77 IAI47_09055 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.53 IAI47_04280 alkylphosphonate utilization protein low > 76
Dickeya dianthicola ME23 0.77 DZA65_RS10845 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.53 DZA65_RS05690 alkylphosphonate utilization protein — —
Dickeya dianthicola 67-19 0.77 HGI48_RS10370 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.53 HGI48_RS05390 alkylphosphonate utilization protein low > 71
Dickeya dadantii 3937 0.77 DDA3937_RS10360 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.55 DDA3937_RS05305 alkylphosphonate utilization protein low > 74
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_22720 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.56 IJEDHG_08375 Alkylphosphonate utilization protein low > 61
Erwinia tracheiphila SCR3 0.77 LU632_RS12895 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.56 LU632_RS22225 alkylphosphonate utilization protein low > 73
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS02895 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.51 PagCFBP13505_RS16690 alkylphosphonate utilization protein low > 74
Azospirillum brasilense Sp245 0.76 AZOBR_RS32240 acetaldehyde dehydrogenase 0.50 AZOBR_RS09590 putative Zn-ribbon-containing protein involved in phosphonate metabolism PhnA-like protein low > 97
Klebsiella michiganensis M5al 0.75 BWI76_RS17250 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.61 BWI76_RS02240 alkylphosphonate utilization operon protein PhnA low > 92
Enterobacter asburiae PDN3 0.75 EX28DRAFT_0865 Alcohol dehydrogenase, class IV 0.62 EX28DRAFT_4198 alkylphosphonate utilization operon protein PhnA low > 76
Klebsiella pneumoniae MKP103 0.75 KDGMDA_24485 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.62 KDGMDA_10685 Protein YjdM low > 95
Enterobacter sp. TBS_079 0.75 MPMX20_02589 Aldehyde-alcohol dehydrogenase 0.61 MPMX20_00327 hypothetical protein low > 85
Escherichia coli ECOR38 0.75 HEPCGN_25070 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 HEPCGN_11240 yjdM Protein YjdM low > 88
Escherichia coli BL21 0.75 ECD_01215 fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase 0.60 ECD_03979 zinc-ribbon family protein low > 61
Escherichia coli ECRC102 0.75 NIAGMN_27630 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 NIAGMN_10450 yjdM Protein YjdM low > 80
Escherichia coli ECRC99 0.75 KEDOAH_25600 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 KEDOAH_15560 yjdM Protein YjdM — —
Escherichia coli ECRC62 0.75 BNILDI_18590 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 BNILDI_06620 yjdM Protein YjdM low > 75
Escherichia coli ECRC98 0.75 JDDGAC_05970 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 JDDGAC_16240 yjdM Protein YjdM low > 87
Escherichia coli ECRC101 0.75 MCAODC_21655 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 MCAODC_03115 yjdM Protein YjdM low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_02444 Aldehyde-alcohol dehydrogenase 0.60 OHPLBJKB_03937 hypothetical protein low > 74
Escherichia coli ECRC100 0.75 OKFHMN_28605 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 OKFHMN_12605 yjdM Protein YjdM low > 79
Escherichia coli ECOR27 0.75 NOLOHH_20445 adhE bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 NOLOHH_04870 yjdM Protein YjdM low > 76
Escherichia coli BW25113 0.75 b1241 adhE fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) 0.60 b4108 phnA hypothetical protein (NCBI) low > 76
Escherichia fergusonii Becca 0.75 EFB2_02686 Aldehyde-alcohol dehydrogenase 0.60 EFB2_04475 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.75 ECOLIN_RS07500 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.60 ECOLIN_RS23775 zinc ribbon domain-containing protein YjdM — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF2749 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 0.61 GFF1466 Alkylphosphonate utilization operon protein PhnA low > 78
Azospirillum sp. SherDot2 0.74 MPMX19_03013 Aldehyde-alcohol dehydrogenase 0.47 MPMX19_01079 hypothetical protein — —
Erwinia amylovora T8 0.73 OLJFJH_13385 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.56 OLJFJH_05595 Protein YjdM low > 58

Not shown: 6 genomes with orthologs for Shew_1910 only; 52 genomes with orthologs for Shew_1931 only