| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Shewanella loihica PV-4 | 1.0 | Shew_3708 | | TetR family transcriptional regulator (RefSeq) | 1.0 | Shew_1528 | | OmpA domain-containing protein (RefSeq) | 0.58 | 8 |
| Shewanella oneidensis MR-1 | 0.70 | SO4675 | | transcriptional regulator, TetR family (NCBI ptt file) | 0.68 | SO2747 | pal | peptidoglycan-associated lipoprotein (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.69 | Shewana3_4103 | | TetR family transcriptional regulator (RefSeq) | 0.68 | Shewana3_2530 | | OmpA/MotB domain-containing protein (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.64 | Sama_0099 | | TetR family transcriptional regulator (RefSeq) | 0.66 | Sama_2085 | | peptidoglycan-associated lipoprotein (RefSeq) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_01725 | | TetR family transcriptional regulator | 0.51 | CSW01_09190 | | peptidoglycan-associated lipoprotein | — | — |
| Pseudomonas sp. SVBP6 | 0.30 | COO64_RS12870 | | TetR/AcrR family transcriptional regulator | 0.27 | COO64_RS20130 | pal | peptidoglycan-associated lipoprotein Pal | — | — |
| Pseudomonas sp. BP01 | 0.30 | JOY50_RS20790 | | TetR/AcrR family transcriptional regulator | 0.28 | JOY50_RS01785 | pal | peptidoglycan-associated lipoprotein Pal | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_08285 | | TetR family transcriptional regulator | 0.27 | AO353_03550 | | peptidoglycan-binding protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_4757 | | transcriptional regulator, TetR family | 0.27 | Psyr_1416 | | OmpA/MotB | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_4757 | | transcriptional regulator, TetR family | 0.27 | Psyr_1416 | | OmpA/MotB | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_2316 | | Transcriptional regulator, TetR family | 0.27 | Pf1N1B4_631 | | 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor | — | — |
| Pseudomonas aeruginosa PA14 | 0.29 | IKLFDK_23595 | | TetR family transcriptional regulator | 0.27 | IKLFDK_04405 | | peptidoglycan-associated lipoprotein Pal | — | — |
| Pseudomonas putida KT2440 | 0.29 | PP_5119 | | Transcriptional regulator, TetR family | 0.27 | PP_1223 | | peptidoglycan-associated lipoprotein | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.29 | DY961_RS21805 | | TetR/AcrR family transcriptional regulator | 0.27 | DY961_RS07565 | pal;go_component=cell | peptidoglycan-associated lipoprotein Pal | — | — |
| Pseudomonas sp. S08-1 | 0.29 | OH686_14175 | | Transcriptional regulator, AcrR family | 0.26 | OH686_19165 | | peptidoglycan-associated lipoprotein | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.29 | DQ20_RS37490 | | TetR/AcrR family transcriptional regulator | 0.27 | DQ20_RS45225 | pal;go_component=cell | peptidoglycan-associated lipoprotein Pal | — | — |
| Marinobacter adhaerens HP15 | 0.28 | HP15_3328 | | transcriptional regulator, TetR family | 0.34 | HP15_2034 | | peptidoglycan-associated lipoprotein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.28 | AO356_13305 | | TetR family transcriptional regulator | 0.27 | AO356_18055 | | peptidoglycan-binding protein | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.28 | PfGW456L13_986 | | Transcriptional regulator, TetR family | 0.27 | PfGW456L13_1859 | | 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor | — | — |
| Pseudomonas sp. RS175 | 0.28 | PFR28_04265 | | hypothetical protein | 0.27 | PFR28_03406 | | Peptidoglycan-associated lipoprotein | — | — |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_0248 | | Transcriptional regulator | 0.27 | Psest_1503 | | peptidoglycan-associated lipoprotein | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.28 | Pf6N2E2_4576 | | Transcriptional regulator, TetR family | 0.27 | Pf6N2E2_5543 | | 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.28 | RR42_RS05390 | | TetR family transcriptional regulator | 0.28 | RR42_RS15455 | | membrane protein | low | > 128 |
| Pseudomonas segetis P6 | 0.27 | ACVTMO_RS21935 | | TetR/AcrR family transcriptional regulator | 0.26 | ACVTMO_RS08390 | pal | peptidoglycan-associated lipoprotein Pal | — | — |
| Pseudomonas sp. DMC3 | 0.27 | GFF232 | | hypothetical protein | 0.27 | GFF5178 | | Peptidoglycan-associated lipoprotein | — | — |
| Paraburkholderia graminis OAS925 | 0.26 | ABIE53_001566 | | AcrR family transcriptional regulator | 0.32 | ABIE53_000881 | | peptidoglycan-associated lipoprotein | — | — |
| Pseudomonas simiae WCS417 | 0.26 | PS417_26840 | | TetR family transcriptional regulator | 0.27 | PS417_22415 | | peptidoglycan-binding protein | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.26 | PFLU_RS28485 | | TetR/AcrR family transcriptional regulator | 0.26 | PFLU_RS24055 | | peptidoglycan-associated lipoprotein Pal | — | — |
| Pseudomonas fluorescens SBW25 | 0.26 | PFLU_RS28485 | | TetR/AcrR family transcriptional regulator | 0.26 | PFLU_RS24055 | | peptidoglycan-associated lipoprotein Pal | — | — |
| Pseudomonas orientalis W4I3 | 0.26 | QF045_RS01240 | | TetR/AcrR family transcriptional regulator | 0.26 | QF045_RS24580 | | peptidoglycan-associated lipoprotein Pal | — | — |
| Pseudomonas lactucae CFBP13502 | 0.26 | GEMAOFIL_05505 | | hypothetical protein | 0.26 | GEMAOFIL_04635 | | Peptidoglycan-associated lipoprotein | — | — |
| Variovorax sp. SCN45 | 0.22 | GFF4992 | | Transcriptional regulator, AcrR family | 0.28 | GFF2194 | | Tol-Pal system peptidoglycan-associated lipoprotein PAL | low | > 127 |
| Variovorax sp. OAS795 | 0.22 | ABID97_RS04235 | | TetR/AcrR family transcriptional regulator | 0.27 | ABID97_RS16690 | | peptidoglycan-associated lipoprotein Pal | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.21 | Ac3H11_1877 | | Transcriptional regulator, TetR family | 0.31 | Ac3H11_2484 | | 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor | — | — |
Not shown: 5 genomes with orthologs for Shew_3708 only; 56 genomes with orthologs for Shew_1528 only