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  • Conservation of cofitness between Shew_1910 and Shew_1445 in Shewanella loihica PV-4

    5 genomes with putative orthologs of both genes

    Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
    Shewanella loihica PV-4 1.0 Shew_1910 bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq) 1.0 Shew_1445 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component (from data) 0.36 1
    Shewanella sp. ANA-3 0.88 Shewana3_1788 bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq) 0.72 Shewana3_1415 tripartite ATP-independent periplasmic transporter DctQ (RefSeq) low > 73
    Shewanella amazonensis SB2B 0.87 Sama_1693 bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq) 0.70 Sama_2210 alpha-ketoglutarate TRAP transporter, small permease component (from data) low > 62
    Shewanella oneidensis MR-1 0.87 SO2136 adhE aldehyde-alcohol dehydrogenase (NCBI ptt file) 0.67 SO3135 C4-dicarboxylate transporter, putative (NCBI ptt file) low > 76
    Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_10165 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.27 CSW01_09645 C4-dicarboxylate ABC transporter permease low > 62
    Azospirillum sp. SherDot2 0.74 MPMX19_03013 Aldehyde-alcohol dehydrogenase 0.13 MPMX19_00660 C4-dicarboxylate TRAP transporter small permease protein DctQ — —

    Not shown: 32 genomes with orthologs for Shew_1910 only; 14 genomes with orthologs for Shew_1445 only