Conservation of cofitness between Shew_2451 and Shew_1385 in Shewanella loihica PV-4

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_2451 patatin (RefSeq) 1.0 Shew_1385 chemotaxis phosphatase, CheZ (RefSeq) 0.36 19
Shewanella amazonensis SB2B 0.64 Sama_1274 hypothetical protein (RefSeq) 0.77 Sama_2278 putative chemotaxis phosphatase, CheZ (RefSeq) low > 62
Shewanella sp. ANA-3 0.58 Shewana3_2605 patatin (RefSeq) 0.76 Shewana3_1361 chemotaxis phosphatase, CheZ (RefSeq) — —
Shewanella oneidensis MR-1 0.58 SO2836 conserved hypothetical protein (NCBI ptt file) 0.74 SO3208 cheZ chemotaxis protein CheZ (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.41 HER17_RS11055 patatin-like phospholipase RssA 0.23 HER17_RS08130 protein phosphatase CheZ low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS10335 patatin-like phospholipase RssA 0.24 DDA3937_RS13515 protein phosphatase CheZ low > 74
Dickeya dianthicola ME23 0.40 DZA65_RS10820 patatin-like phospholipase RssA 0.24 DZA65_RS14045 protein phosphatase CheZ low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS10345 patatin-like phospholipase RssA 0.24 HGI48_RS13560 protein phosphatase CheZ low > 71
Pantoea sp. MT58 0.39 IAI47_09020 patatin-like phospholipase RssA 0.24 IAI47_08340 protein phosphatase CheZ 0.55 20
Escherichia coli Nissle 1917 0.39 ECOLIN_RS07470 patatin-like phospholipase RssA 0.22 ECOLIN_RS10745 protein phosphatase CheZ — —
Escherichia coli BL21 0.39 ECD_01210 putative patatin-like family phospholipase 0.22 ECD_01852 chemotaxis regulator, protein phosphatase for CheY low > 61
Escherichia fergusonii Becca 0.39 EFB2_02692 putative NTE family protein 0.22 EFB2_02062 Protein phosphatase CheZ low > 86
Escherichia coli ECRC98 0.39 JDDGAC_05995 rssA patatin-like phospholipase RssA 0.21 JDDGAC_00735 cheZ protein phosphatase CheZ low > 87
Escherichia coli ECRC102 0.39 NIAGMN_27655 rssA patatin-like phospholipase RssA 0.21 NIAGMN_01900 cheZ protein phosphatase CheZ low > 80
Escherichia coli ECRC62 0.39 BNILDI_18625 rssA patatin-like phospholipase RssA 0.22 BNILDI_15390 cheZ protein phosphatase CheZ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_02451 putative NTE family protein 0.22 OHPLBJKB_01847 Protein phosphatase CheZ low > 74
Pantoea agglomerans CFBP13505 P0401 0.39 PagCFBP13505_RS02860 patatin-like phospholipase RssA 0.24 PagCFBP13505_RS02220 protein phosphatase CheZ low > 74
Escherichia coli ECOR38 0.39 HEPCGN_25040 rssA patatin-like phospholipase RssA 0.22 HEPCGN_04580 cheZ protein phosphatase CheZ low > 88
Escherichia coli BW25113 0.39 b1234 rssA conserved protein (RefSeq) 0.22 b1881 cheZ chemotaxis regulator, protein phosphatase for CheY (NCBI) low > 76
Escherichia coli ECRC99 0.39 KEDOAH_25575 rssA patatin-like phospholipase RssA 0.21 KEDOAH_01945 cheZ protein phosphatase CheZ — —
Escherichia coli ECRC100 0.39 OKFHMN_28580 rssA patatin-like phospholipase RssA 0.21 OKFHMN_26160 cheZ protein phosphatase CheZ low > 79
Escherichia coli ECRC101 0.39 MCAODC_21680 rssA patatin-like phospholipase RssA 0.21 MCAODC_19245 cheZ protein phosphatase CheZ low > 88
Escherichia coli ECOR27 0.39 NOLOHH_20470 rssA patatin-like phospholipase RssA 0.22 NOLOHH_16600 cheZ protein phosphatase CheZ low > 76
Rahnella sp. WP5 0.39 EX31_RS10105 patatin-like phospholipase RssA 0.21 EX31_RS11350 protein phosphatase CheZ low > 89
Serratia liquefaciens MT49 0.39 IAI46_14255 patatin-like phospholipase RssA 0.22 IAI46_16005 protein phosphatase CheZ low > 86
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0860 Predicted esterase of the alpha-beta hydrolase superfamily 0.24 EX28DRAFT_0675 Chemotaxis protein low > 76
Enterobacter sp. TBS_079 0.39 MPMX20_02594 putative NTE family protein 0.24 MPMX20_02785 Protein phosphatase CheZ low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF2754 UPF0028 protein YchK 0.23 GFF1662 Chemotaxis response - phosphatase CheZ low > 78
Alteromonas macleodii MIT1002 0.38 MIT1002_02140 NTE family protein RssA 0.52 MIT1002_01105 chemotaxis regulator CheZ low > 70
Paraburkholderia graminis OAS925 0.28 ABIE53_001764 NTE family protein 0.22 ABIE53_000117 chemotaxis protein CheZ low > 113
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_06473 NTE family protein 0.22 H281DRAFT_05749 chemotaxis protein CheZ low > 103
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS07670 patatin 0.23 BPHYT_RS18960 chemotaxis protein CheZ — —
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS23405 patatin-like phospholipase family protein 0.22 QEN71_RS28975 protein phosphatase CheZ low > 153
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_2206 UPF0028 protein YchK 0.40 PfGW456L13_4329 Chemotaxis response - phosphatase CheZ low > 87
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_310 UPF0028 protein YchK 0.40 Pf1N1B4_3628 Chemotaxis response - phosphatase CheZ — —
Pseudomonas sp. S08-1 0.27 OH686_01880 Bacterial patatin-like phospholipase domain containing protein 0.40 OH686_02720 Chemotaxis response - phosphatase CheZ low > 80
Pseudomonas simiae WCS417 0.27 PS417_08310 alpha/beta hydrolase 0.42 PS417_19685 protein phosphatase low > 88
Pseudomonas fluorescens SBW25 0.27 PFLU_RS08250 alpha/beta hydrolase 0.42 PFLU_RS21650 protein phosphatase CheZ low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS08250 alpha/beta hydrolase 0.42 PFLU_RS21650 protein phosphatase CheZ low > 109
Pseudomonas putida KT2440 0.27 PP_2305 conserved protein of unknown function 0.40 PP_4339 Protein phosphatase CheZ low > 96
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_01791 putative NTE family protein 0.42 GEMAOFIL_04136 Protein phosphatase CheZ 0.59 62
Variovorax sp. SCN45 0.26 GFF4394 FIG00613342: Bacterial patatin-like phospholipase domain containing protein 0.24 GFF5769 Chemotaxis response - phosphatase CheZ low > 127
Pseudomonas sp. BP01 0.26 JOY50_RS25890 patatin-like phospholipase family protein 0.40 JOY50_RS00575 protein phosphatase CheZ — —
Pseudomonas sp. DMC3 0.26 GFF4641 putative NTE family protein 0.40 GFF2474 Protein phosphatase CheZ low > 89
Pseudomonas stutzeri RCH2 0.26 Psest_2463 Predicted esterase of the alpha-beta hydrolase superfamily 0.40 Psest_1742 Chemotaxis protein low > 67
Pseudomonas segetis P6 0.26 MPMX49_02675 putative NTE family protein 0.40 MPMX49_03125 Protein phosphatase CheZ low > 75
Pseudomonas sp. SVBP6 0.26 COO64_RS09710 patatin-like phospholipase family protein 0.40 COO64_RS25635 protein phosphatase CheZ low > 93
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_18940 alpha/beta hydrolase 0.41 AO353_18795 protein phosphatase low > 101
Pseudomonas aeruginosa PA14 0.25 IKLFDK_07865 alpha/beta hydrolase 0.42 IKLFDK_06930 protein phosphatase CheZ low > 100
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_15480 Serine protease 0.14 OKGIIK_02840 cheZ chemotaxis protein CheZ — —
Pseudomonas sp. RS175 0.25 PFR28_00944 putative NTE family protein 0.41 PFR28_00854 Protein phosphatase CheZ low > 88
Rhodanobacter sp000427505 FW510-R12 0.25 LRK53_RS02520 patatin-like phospholipase family protein 0.15 LRK53_RS14985 protein phosphatase CheZ — —
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_2489 UPF0028 protein YchK 0.40 Pf6N2E2_2571 Chemotaxis response - phosphatase CheZ low > 103
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_03290 alpha/beta hydrolase 0.41 AO356_03720 protein phosphatase low > 104
Rhodanobacter denitrificans MT42 0.24 LRK55_RS08480 patatin-like phospholipase family protein 0.14 LRK55_RS13330 protein phosphatase CheZ — —
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS08715 patatin-like phospholipase family protein 0.14 LRK54_RS13590 protein phosphatase CheZ — —
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS14850 patatin-like phospholipase family protein 0.16 ABZR86_RS20275 protein phosphatase CheZ — —

Not shown: 14 genomes with orthologs for Shew_2451 only; 17 genomes with orthologs for Shew_1385 only