Conservation of cofitness between SO2865 and SO4733 in Shewanella oneidensis MR-1

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2865 L-lysine exporter, putative (NCBI ptt file) 1.0 SO4733 lypA lysophospholipase L2 (NCBI ptt file) 0.37 3
Shewanella sp. ANA-3 0.97 Shewana3_1653 lysine exporter protein LysE/YggA (RefSeq) 0.95 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) low > 73
Shewanella loihica PV-4 0.75 Shew_1845 lysine exporter protein LysE/YggA (RefSeq) 0.57 Shew_3723 alpha/beta hydrolase fold (RefSeq) 0.28 26
Shewanella amazonensis SB2B 0.74 Sama_2988 L-lysine exporter, putative (RefSeq) 0.49 Sama_0083 alpha/beta hydrolase fold (RefSeq) low > 62
Rhizobium sp. OAE497 0.43 ABIE40_RS06180 LysE/ArgO family amino acid transporter 0.17 ABIE40_RS16315 alpha/beta hydrolase low > 107
Agrobacterium fabrum C58 0.41 Atu0927 LysE family transporter 0.18 Atu3886 lysophospholipase low > 89
Phaeobacter inhibens DSM 17395 0.41 PGA1_c21730 putative arginine exporter protein 0.19 PGA1_c07480 Lysophospholipase low > 62
Azospirillum sp. SherDot2 0.39 MPMX19_01758 Arginine exporter protein ArgO 0.19 MPMX19_00440 Lysophospholipase L2 low > 112
Dinoroseobacter shibae DFL-12 0.37 Dshi_0712 Lysine exporter protein (LYSE/YGGA) (RefSeq) 0.18 Dshi_0780 alpha/beta hydrolase fold (RefSeq) low > 64
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2969 L-lysine exporter 0.31 EX28DRAFT_4490 Lysophospholipase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_04883 L-lysine exporter family protein LysE/ArgO 0.09 H281DRAFT_03907 Lysophospholipase, alpha-beta hydrolase superfamily low > 103
Variovorax sp. OAS795 0.36 ABID97_RS23870 LysE/ArgO family amino acid transporter 0.08 ABID97_RS02565 lysophospholipase low > 91
Enterobacter sp. TBS_079 0.36 MPMX20_03775 Arginine exporter protein ArgO 0.29 MPMX20_04455 Lysophospholipase L2 0.19 11
Azospirillum brasilense Sp245 0.36 AZOBR_RS01605 amino acid transporter 0.19 AZOBR_RS05105 lysophospholipase low > 97
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS14020 LysE/ArgO family amino acid transporter 0.10 ABZR87_RS04225 alpha/beta hydrolase low > 80
Klebsiella michiganensis M5al 0.35 BWI76_RS23965 arginine exporter protein 0.29 BWI76_RS01260 lysophospholipase L2 low > 92
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_01775 L-lysine exporter family protein LysE/ArgO 0.09 OKGIIK_14190 Alpha/beta hydrolase low > 53
Rahnella sp. WP5 0.35 EX31_RS21440 arginine exporter ArgO 0.33 EX31_RS15225 lysophospholipase L2 low > 89
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS23615 LysE/ArgO family amino acid transporter 0.09 QEN71_RS04155 alpha/beta hydrolase low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF5066 Arginine exporter protein ArgO 0.09 GFF2456 Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23); putative low > 90
Klebsiella pneumoniae MKP103 0.35 KDGMDA_04440 arginine exporter ArgO 0.28 KDGMDA_09755 lysophospholipase L2 low > 95
Pectobacterium carotovorum WPP14 0.35 HER17_RS02705 arginine exporter ArgO 0.31 HER17_RS01410 lysophospholipase L2 low > 75
Pseudomonas sp. S08-1 0.35 OH686_07205 Arginine exporter protein ArgO 0.11 OH686_05765 Lysophospholipase / Monoglyceride lipase low > 80
Escherichia fergusonii Becca 0.34 EFB2_00983 Arginine exporter protein ArgO 0.31 EFB2_04812 Lysophospholipase L2 low > 86
Escherichia coli ECOR38 0.34 HEPCGN_18715 argO arginine exporter ArgO 0.30 HEPCGN_13045 pldB lysophospholipase L2 low > 88
Escherichia coli Nissle 1917 0.34 ECOLIN_RS16245 arginine exporter ArgO 0.31 ECOLIN_RS21960 lysophospholipase L2 — —
Escherichia coli ECOR27 0.34 NOLOHH_11320 argO arginine exporter ArgO 0.31 NOLOHH_06475 pldB lysophospholipase L2 low > 76
Escherichia coli ECRC98 0.34 JDDGAC_23040 argO arginine exporter ArgO 0.31 JDDGAC_17970 pldB lysophospholipase L2 low > 87
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS07435 amino acid transporter 0.09 BPHYT_RS30410 chloroperoxidase 0.20 35
Escherichia coli ECRC100 0.34 OKFHMN_19410 argO arginine exporter ArgO 0.31 OKFHMN_14345 pldB lysophospholipase L2 low > 79
Escherichia coli ECRC102 0.34 NIAGMN_17175 argO arginine exporter ArgO 0.31 NIAGMN_12100 pldB lysophospholipase L2 low > 80
Escherichia coli ECRC101 0.34 MCAODC_09930 argO arginine exporter ArgO 0.31 MCAODC_04850 pldB lysophospholipase L2 low > 87
Escherichia coli ECRC99 0.34 KEDOAH_08730 argO arginine exporter ArgO 0.31 KEDOAH_13805 pldB lysophospholipase L2 — —
Alteromonas macleodii MIT1002 0.33 MIT1002_00130 Arginine exporter protein ArgO 0.31 MIT1002_00479 lysophospholipase L2 low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3018 Arginine exporter protein ArgO 0.30 GFF251 Lysophospholipase L2 (EC 3.1.1.5) low > 78
Escherichia coli BW25113 0.33 b2923 argO arginine exporter protein (NCBI) 0.31 b3825 pldB lysophospholipase L(2) (NCBI) low > 76
Serratia liquefaciens MT49 0.33 IAI46_20920 arginine exporter ArgO 0.32 IAI46_00785 lysophospholipase L2 low > 87
Escherichia coli BL21 0.33 ECD_02754 arginine transporter 0.31 ECD_03704 lysophospholipase L2 low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00793 Arginine exporter protein ArgO 0.31 OHPLBJKB_04226 Lysophospholipase L2 low > 74
Pantoea sp. MT58 0.33 IAI47_03705 arginine exporter ArgO 0.30 IAI47_18340 lysophospholipase L2 low > 76
Escherichia coli ECRC62 0.33 BNILDI_09855 argO arginine exporter ArgO 0.31 BNILDI_05055 pldB lysophospholipase L2 low > 75
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS15995 arginine exporter ArgO 0.30 PagCFBP13505_RS15320 lysophospholipase L2 0.69 46
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_02555 amino acid transporter 0.33 CSW01_00685 lysophospholipase low > 62
Dickeya dianthicola ME23 0.32 DZA65_RS02210 amino acid transporter 0.29 DZA65_RS21030 lysophospholipase L2 low > 75
Dickeya dianthicola 67-19 0.31 HGI48_RS02085 amino acid transporter 0.29 HGI48_RS19985 lysophospholipase L2 low > 71
Dickeya dadantii 3937 0.31 DDA3937_RS02115 amino acid transporter 0.28 DDA3937_RS19830 lysophospholipase L2 low > 74
Erwinia amylovora T8 0.30 OLJFJH_08670 arginine exporter ArgO 0.31 OLJFJH_06455 lysophospholipase L2 low > 58
Erwinia tracheiphila SCR3 0.25 LU632_RS05560 LysE family transporter 0.30 LU632_RS24080 pldB lysophospholipase L2 low > 73
Erwinia tracheiphila HP pepo 2.2 0.22 IJEDHG_03345 lysE arginine transporter 0.30 IJEDHG_08720 pldB lysophospholipase L2 low > 61

Not shown: 40 genomes with orthologs for SO2865 only; 8 genomes with orthologs for SO4733 only