Conservation of cofitness between SO2153 and SO3455 in Shewanella oneidensis MR-1

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2153 moxR MoxR protein (NCBI ptt file) 1.0 SO3455 relA GTP pyrophosphokinase (NCBI ptt file) 0.25 13
Shewanella sp. ANA-3 0.93 Shewana3_2242 ATPase (RefSeq) 0.98 Shewana3_1111 (p)ppGpp synthetase I, SpoT/RelA (RefSeq) 0.63 23
Shewanella loihica PV-4 0.77 Shew_2126 ATPase (RefSeq) 0.84 Shew_1202 (p)ppGpp synthetase I, SpoT/RelA (RefSeq) low > 60
Shewanella amazonensis SB2B 0.74 Sama_1897 MoxR protein (RefSeq) 0.86 Sama_1033 GTP diphosphokinase (RefSeq) low > 62
Marinobacter adhaerens HP15 0.56 HP15_2075 MoxR protein 0.46 HP15_791 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA low > 73
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS06210 MoxR family ATPase 0.40 ABZR86_RS19725 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 74
Alteromonas macleodii MIT1002 0.55 MIT1002_01532 regulatory ATPase RavA 0.56 MIT1002_00794 GTP pyrophosphokinase 0.60 27
Dechlorosoma suillum PS 0.55 Dsui_1975 MoxR-like ATPase 0.39 Dsui_2816 (p)ppGpp synthetase, RelA/SpoT family low > 51
Pseudomonas aeruginosa PA14 0.54 IKLFDK_14610 AAA family ATPase 0.49 IKLFDK_04200 GTP diphosphokinase 0.48 9
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_05680 moxR AAA family ATPase 0.39 OKGIIK_02170 relA GTP diphosphokinase low > 53
Pseudomonas segetis P6 0.53 MPMX49_02670 hypothetical protein 0.48 MPMX49_01654 GTP pyrophosphokinase low > 75
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_1012 MoxR-like ATPases 0.44 B158DRAFT_2277 (p)ppGpp synthetase, RelA/SpoT family low > 40
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_2053 moxR protein, putative 0.48 Psyr_3695 RelA/SpoT protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_2053 moxR protein, putative 0.48 Psyr_3695 RelA/SpoT protein low > 86
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS16695 MoxR family ATPase 0.37 ABZR87_RS13745 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 80
Variovorax sp. SCN45 0.52 GFF2663 FIG022979: MoxR-like ATPases 0.32 GFF403 Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I low > 127
Pseudomonas stutzeri RCH2 0.52 Psest_2458 MoxR-like ATPases 0.48 Psest_1640 (p)ppGpp synthetase, RelA/SpoT family low > 67
Ralstonia solanacearum GMI1000 0.52 RS_RS17675 MoxR family ATPase 0.37 RS_RS07930 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 80
Ralstonia solanacearum PSI07 0.51 RPSI07_RS00345 MoxR family ATPase 0.37 RPSI07_RS15685 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 81
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS36135 ATPase AAA 0.36 RR42_RS06585 GTP pyrophosphokinase low > 128
Ralstonia solanacearum UW163 0.51 UW163_RS23495 MoxR family ATPase 0.37 UW163_RS15115 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS22875 MoxR family ATPase 0.37 RALBFv3_RS01805 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 76
Pseudomonas sp. S08-1 0.51 OH686_01865 MoxR-like 0.49 OH686_18960 Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase , (p)ppGpp synthetase I low > 80
Rhodanobacter denitrificans MT42 0.50 LRK55_RS00995 AAA family ATPase 0.39 LRK55_RS12430 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS01220 AAA family ATPase 0.39 LRK54_RS12725 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 59
Acidovorax sp. GW101-3H11 0.49 Ac3H11_3194 FIG022979: MoxR-like ATPases 0.34 Ac3H11_362 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I low > 79
Acinetobacter radioresistens SK82 0.47 MPMX26_01070 hypothetical protein 0.38 MPMX26_00539 GTP pyrophosphokinase
Lysobacter sp. OAE881 0.46 ABIE51_RS13985 AAA family ATPase 0.35 ABIE51_RS05170 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 62

Not shown: 8 genomes with orthologs for SO2153 only; 57 genomes with orthologs for SO3455 only