Conservation of cofitness between SO1560 and SO3230 in Shewanella oneidensis MR-1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO1560 phosphate-binding protein (NCBI ptt file) 1.0 SO3230 flrC flagellar regulatory protein C (NCBI ptt file) 0.61 20
Shewanella sp. ANA-3 0.96 Shewana3_2877 phosphate binding protein (RefSeq) 0.97 Shewana3_1340 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) low > 73
Shewanella amazonensis SB2B 0.90 Sama_1076 phosphate-binding protein (RefSeq) 0.81 Sama_2299 response regulator receiver protein (RefSeq) low > 62
Shewanella loihica PV-4 0.90 Shew_2747 phosphate binding protein (RefSeq) 0.82 Shew_1364 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq)
Pseudomonas sp. DMC3 0.74 GFF479 Phosphate-binding protein PstS 0.51 GFF2447 Regulatory protein AtoC low > 89
Pseudomonas simiae WCS417 0.73 PS417_28085 phosphate-binding protein 0.51 PS417_19815 Fis family transcriptional regulator
Pseudomonas lactucae CFBP13502 0.73 GEMAOFIL_00083 Phosphate-binding protein PstS 0.52 GEMAOFIL_04161 Regulatory protein AtoC low > 96
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS29770 phosphate ABC transporter substrate-binding protein PstS 0.52 PFLU_RS21785 sigma-54-dependent Fis family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.73 PFLU_RS29770 phosphate ABC transporter substrate-binding protein PstS 0.52 PFLU_RS21785 sigma-54-dependent Fis family transcriptional regulator low > 109
Pseudomonas segetis P6 0.72 ACVTMO_RS00605 phosphate ABC transporter substrate-binding protein PstS family protein 0.52 ACVTMO_RS15595 sigma-54-dependent transcriptional regulator low > 75
Pseudomonas orientalis W4I3 0.72 QF045_RS02440 phosphate ABC transporter substrate-binding protein PstS 0.53 QF045_RS21945 sigma-54 dependent transcriptional regulator low > 93
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_753 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 0.52 PfGW456L13_4355 Flagellar regulatory protein FleQ low > 87
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_4075 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 0.52 Pf6N2E2_2595 Flagellar regulatory protein FleQ low > 103
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_09905 phosphate-binding protein 0.51 AO353_18670 Fis family transcriptional regulator low > 101
Pseudomonas sp. RS175 0.72 PFR28_04489 Phosphate-binding protein PstS 0.53 PFR28_00830 Regulatory protein AtoC low > 88
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_11045 phosphate-binding protein 0.51 AO356_03845 Fis family transcriptional regulator low > 104
Pseudomonas aeruginosa PUPa3 0.71 DQ20_RS49390 pstS;inference=COORDINATES phosphate ABC transporter substrate-binding protein PstS 0.51 DQ20_RS45880 fleR;inference=COORDINATES sigma-54-dependent response regulator transcription factor FleR low > 101
Pseudomonas aeruginosa MRSN321 0.71 DY961_RS12740 pstS;inference=COORDINATES phosphate ABC transporter substrate-binding protein PstS 0.52 DY961_RS06955 fleR;inference=COORDINATES sigma-54-dependent response regulator transcription factor FleR low > 100
Pseudomonas aeruginosa PA14 0.71 IKLFDK_26610 phosphate ABC transporter substrate-binding protein PstS 0.52 IKLFDK_05055 sigma-54-dependent response regulator transcription factor FleR low > 98
Pseudomonas sp. BP01 0.71 JOY50_RS08855 phosphate ABC transporter substrate-binding protein PstS 0.52 JOY50_RS00695 sigma-54 dependent transcriptional regulator low > 84
Pseudomonas putida KT2440 0.71 PP_5329 putative phosphate ABC transporter, periplasmic phosphate-binding protein 0.52 PP_4371 two component system AtoC DNA-binding transcriptional activator low > 96
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_5041 phosphate ABC transporter substrate-binding protein, PhoT family 0.51 Psyr_3459 Helix-turn-helix, Fis-type low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_5041 phosphate ABC transporter substrate-binding protein, PhoT family 0.51 Psyr_3459 Helix-turn-helix, Fis-type low > 86
Pseudomonas stutzeri RCH2 0.70 Psest_0219 phosphate binding protein 0.53 Psest_1767 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Pseudomonas sp. S08-1 0.70 OH686_13410 Phosphate ABC transporter, substrate-binding protein PstS 0.53 OH686_02845 Flagellar two-component response regulator FleR low > 80
Pseudomonas sp. SVBP6 0.70 COO64_RS01715 phosphate ABC transporter substrate-binding protein PstS 0.51 COO64_RS21290 sigma-54 dependent transcriptional regulator low > 93
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_0902 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) 0.29 B158DRAFT_0521 PEP-CTERM-box response regulator transcription factor low > 40
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_03770 phosphate ABC transporter substrate-binding protein 0.62 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator low > 62
Alteromonas macleodii MIT1002 0.49 MIT1002_00753 Phosphate-binding protein PstS 1 precursor 0.61 MIT1002_01083 Transcriptional regulatory protein ZraR low > 70
Serratia liquefaciens MT49 0.48 IAI46_04785 phosphate ABC transporter substrate-binding protein PstS family protein 0.33 IAI46_19460 two-component system response regulator GlrR low > 87
Dechlorosoma suillum PS 0.12 Dsui_3056 phosphate binding protein 0.46 Dsui_1758 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Not shown: 18 genomes with orthologs for SO1560 only; 10 genomes with orthologs for SO3230 only