Conservation of cofitness between SO2342 and SO2772 in Shewanella oneidensis MR-1

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2342 nadA quinolinate synthetase complex, subunit A (NCBI ptt file) 1.0 SO2772 cytosolic long-chain acyl-CoA thioester hydrolase family protein (NCBI ptt file) 0.51 16
Shewanella sp. ANA-3 0.98 Shewana3_2128 quinolinate synthetase (RefSeq) 0.98 Shewana3_2555 thioesterase superfamily protein (RefSeq) — —
Shewanella amazonensis SB2B 0.88 Sama_1712 quinolinate synthetase (RefSeq) 0.88 Sama_1977 cytosolic long-chain acyl-CoA thioester hydrolase family protein (RefSeq) — —
Shewanella loihica PV-4 0.87 Shew_1928 quinolinate synthetase (RefSeq) 0.87 Shew_1607 thioesterase superfamily protein (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.78 CSW01_09180 quinolinate synthase 0.75 CSW01_18835 acyl-CoA thioesterase low > 62
Marinobacter adhaerens HP15 0.70 HP15_2032 quinolinate synthetase complex, A subunit 0.33 HP15_1435 thioesterase superfamily protein — —
Pseudomonas putida KT2440 0.68 PP_1231 quinolinate synthase [4Fe-4S] cluster subunit 0.27 PP_5356 Protein VdlD low > 96
Pseudomonas segetis P6 0.68 MPMX49_01696 Quinolinate synthase A 0.32 MPMX49_00198 hypothetical protein — —
Pseudomonas sp. BP01 0.68 JOY50_RS01740 nadA quinolinate synthase NadA 0.27 JOY50_RS08715 acyl-CoA thioesterase low > 84
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5553 Quinolinate synthetase (EC 2.5.1.72) 0.30 Pf6N2E2_4269 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 103
Pseudomonas sp. RS175 0.67 PFR28_03388 Quinolinate synthase A 0.32 PFR28_04527 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18145 quinolinate synthase A 0.32 AO356_11970 acyl-CoA hydrolase low > 104
Pseudomonas sp. DMC3 0.67 GFF5174 Quinolinate synthase A 0.32 GFF516 hypothetical protein low > 89
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1863 Quinolinate synthetase (EC 2.5.1.72) 0.33 PfGW456L13_719 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 87
Pseudomonas sp. SVBP6 0.67 COO64_RS20215 nadA quinolinate synthase NadA 0.31 COO64_RS01865 acyl-CoA thioesterase low > 93
Pseudomonas aeruginosa PA14 0.67 IKLFDK_04555 quinolinate synthase NadA 0.31 IKLFDK_13530 acyl-CoA thioesterase low > 98
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_626 Quinolinate synthetase (EC 2.5.1.72) 0.32 Pf1N1B4_2001 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 87
Pseudomonas aeruginosa MRSN321 0.67 DY961_RS07460 nadA;go_function=quinolinate quinolinate synthase NadA 0.31 DY961_RS03745 acyl-CoA thioesterase low > 100
Pseudomonas aeruginosa PUPa3 0.67 DQ20_RS45330 nadA;go_function=quinolinate quinolinate synthase NadA 0.31 DQ20_RS34780 acyl-CoA thioesterase low > 101
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_03525 quinolinate synthase A 0.33 AO353_10080 acyl-CoA hydrolase low > 101
Pseudomonas stutzeri RCH2 0.67 Psest_1509 quinolinate synthetase complex, A subunit 0.34 Psest_0771 Acyl-CoA hydrolase low > 67
Pseudomonas lactucae CFBP13502 0.66 GEMAOFIL_04613 Quinolinate synthase A 0.32 GEMAOFIL_00120 hypothetical protein low > 96
Pseudomonas orientalis W4I3 0.66 QF045_RS24510 quinolinate synthase NadA 0.32 QF045_RS02625 acyl-CoA thioesterase low > 93
Pseudomonas simiae WCS417 0.66 PS417_22385 quinolinate synthase A 0.32 PS417_28260 VdlD low > 88
Pseudomonas fluorescens SBW25 0.66 PFLU_RS24025 quinolinate synthase NadA 0.32 PFLU_RS29920 acyl-CoA thioesterase low > 109
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS24025 quinolinate synthase NadA 0.32 PFLU_RS29920 acyl-CoA thioesterase low > 109
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1542 quinolinate synthetase 0.30 Psyr_5069 Thioesterase superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1542 quinolinate synthetase 0.30 Psyr_5069 Thioesterase superfamily low > 86
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS00355 quinolinate synthase NadA 0.33 ABZR87_RS17075 acyl-CoA thioesterase low > 80
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS04735 quinolinate synthase NadA 0.32 RALBFv3_RS22490 acyl-CoA thioesterase low > 76
Ralstonia solanacearum UW163 0.64 UW163_RS08935 quinolinate synthase NadA 0.32 UW163_RS23035 acyl-CoA thioesterase — —
Ralstonia solanacearum GMI1000 0.63 RS_RS12295 quinolinate synthase 0.32 RS_RS18125 acyl-CoA thioesterase low > 80
Ralstonia solanacearum PSI07 0.63 RPSI07_RS12650 quinolinate synthase NadA 0.32 RPSI07_RS00670 acyl-CoA thioesterase low > 81
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS11065 quinolinate synthetase 0.33 HSERO_RS13415 VdlD low > 78
Paraburkholderia graminis OAS925 0.63 ABIE53_003294 quinolinate synthase 0.54 ABIE53_003085 acyl-CoA hydrolase low > 113
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS15650 quinolinate synthetase 0.55 BPHYT_RS14620 acyl-CoA hydrolase low > 109
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS17020 quinolinate synthetase 0.34 RR42_RS28960 acyl-CoA hydrolase low > 128
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS03060 quinolinate synthase NadA 0.54 QEN71_RS04355 acyl-CoA thioesterase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04071 quinolinate synthetase 0.54 H281DRAFT_04313 Acyl-CoA hydrolase low > 103
Acidovorax sp. GW101-3H11 0.60 Ac3H11_3837 Quinolinate synthetase (EC 2.5.1.72) 0.35 Ac3H11_4397 thioesterase superfamily low > 79
Variovorax sp. OAS795 0.59 ABID97_RS07415 quinolinate synthase NadA 0.50 ABID97_RS04245 acyl-CoA thioesterase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF1216 Quinolinate synthetase (EC 2.5.1.72) 0.34 GFF2680 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 90
Variovorax sp. SCN45 0.58 GFF2575 Quinolinate synthetase (EC 2.5.1.72) 0.49 GFF4990 Acyl-CoA hydrolase (EC 3.1.2.20) low > 127
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS21180 quinolinate synthase 0.55 CA265_RS15705 acyl-CoA thioesterase — —
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS13900 quinolinate synthase NadA 0.52 LRK54_RS03670 acyl-CoA thioesterase low > 59
Rhodanobacter denitrificans MT42 0.23 LRK55_RS13615 quinolinate synthase NadA 0.50 LRK55_RS03420 acyl-CoA thioesterase low > 63
Rhodanobacter sp000427505 FW510-R12 0.23 LRK53_RS14710 quinolinate synthase NadA 0.52 LRK53_RS06275 acyl-CoA thioesterase low > 59
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_00930 nadA quinolinate synthase NadA 0.52 OKGIIK_10560 yciA acyl-CoA thioesterase low > 53
Sinorhizobium meliloti 1021 0.22 SMc02601 quinolinate synthetase 0.33 SM_b21634 acyl-CoA thioester hydrolase low > 103

Not shown: 60 genomes with orthologs for SO2342 only; 3 genomes with orthologs for SO2772 only