Conservation of cofitness between SO1892 and SO2155 in Shewanella oneidensis MR-1

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO1892 atoD acetate CoA-transferase, subunit A (NCBI ptt file) 1.0 SO2155 glyoxalase family protein (NCBI ptt file) 0.30 10
Shewanella sp. ANA-3 0.99 Shewana3_1667 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.87 Shewana3_2315 glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq) — —
Alteromonas macleodii MIT1002 0.76 MIT1002_02001 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.67 MIT1002_03753 putative lyase low > 70
Pseudomonas segetis P6 0.73 MPMX49_02805 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.66 MPMX49_02318 hypothetical protein low > 75
Enterobacter sp. TBS_079 0.72 MPMX20_01912 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.60 MPMX20_00871 hypothetical protein low > 85
Klebsiella pneumoniae MKP103 0.72 KDGMDA_23725 succinyl-CoA--3-ketoacid-CoA transferase 0.58 KDGMDA_13550 VOC family protein low > 95
Escherichia coli ECOR27 0.72 NOLOHH_18990 atoD succinyl-CoA--3-ketoacid-CoA transferase 0.58 NOLOHH_02465 yaeR VOC family protein low > 76
Escherichia coli ECRC62 0.72 BNILDI_17475 atoD succinyl-CoA--3-ketoacid-CoA transferase 0.58 BNILDI_09205 yaeR VOC family protein low > 75
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1708 3-oxoacid CoA-transferase, A subunit 0.60 EX28DRAFT_3775 Lactoylglutathione lyase and related lyases low > 76
Lysobacter sp. OAE881 0.65 ABIE51_RS04380 CoA transferase subunit A 0.55 ABIE51_RS00375 VOC family protein low > 62
Pedobacter sp. GW460-11-11-14-LB5 0.65 CA265_RS06305 succinyl-CoA--3-ketoacid-CoA transferase 0.65 CA265_RS05200 hypothetical protein low > 88
Cellulophaga baltica 18 0.64 M666_RS05235 CoA transferase subunit A 0.62 M666_RS15400 VOC family protein low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.63 Echvi_3272 3-oxoacid CoA-transferase, A subunit 0.63 Echvi_2363 Predicted ring-cleavage extradiol dioxygenase low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.62 ABZR88_RS15870 CoA transferase subunit A 0.64 ABZR88_RS09770 VOC family protein low > 71
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.4478.1 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.67 Xcc-8004.3591.1 FIG01280259: hypothetical protein low > 74
Pseudomonas stutzeri RCH2 0.61 Psest_1078 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) 0.68 Psest_0758 Lactoylglutathione lyase and related lyases low > 67
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04495 3-oxoacid CoA-transferase subunit A 0.68 H281DRAFT_02954 glyoxylase I family protein low > 103
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS23190 succinyl-CoA:3-ketoacid-CoA transferase 0.60 HSERO_RS02665 hypothetical protein — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_132 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.62 Ac3H11_2068 FIG01280259: hypothetical protein — —
Sphingobium sp. HT1-2 0.54 GFF354 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.52 GFF1720 Uncharacterized protein YaeR with similarity to glyoxylase family low > 95
Klebsiella michiganensis M5al 0.44 BWI76_RS16145 3-oxoadipate CoA-transferase 0.60 BWI76_RS05305 VOC family protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_01489 Acetate CoA-transferase subunit alpha 0.57 OHPLBJKB_03476 hypothetical protein low > 74
Serratia liquefaciens MT49 0.42 IAI46_16155 3-oxoacid CoA-transferase subunit A 0.60 IAI46_20160 VOC family protein low > 86
Escherichia coli BW25113 0.41 b2221 atoD acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) 0.58 b0187 yaeR orf, hypothetical protein (VIMSS) low > 76
Escherichia coli BL21 0.41 ECD_02148 acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit 0.58 ECD_00185 putative lyase low > 61
Escherichia coli Nissle 1917 0.41 ECOLIN_RS12970 acetate CoA-transferase subunit alpha 0.58 ECOLIN_RS01015 VOC family protein — —
Escherichia coli ECOR38 0.41 HEPCGN_22425 atoD acetate CoA-transferase subunit alpha 0.58 HEPCGN_08075 yaeR VOC family protein low > 88
Escherichia fergusonii Becca 0.41 EFB2_01634 Acetate CoA-transferase subunit alpha 0.58 EFB2_03857 hypothetical protein 0.30 54

Not shown: 50 genomes with orthologs for SO1892 only; 20 genomes with orthologs for SO2155 only