Conservation of cofitness between SO1897 and SO2119 in Shewanella oneidensis MR-1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO1897 ivd isovaleryl-CoA dehydrogenase (NCBI ptt file) 1.0 SO2119 response regulator (NCBI ptt file) 0.34 20
Shewanella sp. ANA-3 0.99 Shewana3_1672 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.52 Shewana3_2220 response regulator receiver protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.83 MIT1002_01669 Acyl-CoA dehydrogenase 0.16 MIT1002_01320 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP low > 70
Pseudomonas sp. S08-1 0.82 OH686_00855 Isovaleryl-CoA dehydrogenase 0.14 OH686_02805 Serine phosphatase RsbU, regulator of sigma subunit / Serine-protein kinase RsbW low > 80
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_2591 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) 0.17 PfGW456L13_4347 Serine phosphatase RsbU, regulator of sigma subunit low > 87
Pseudomonas simiae WCS417 0.81 PS417_17015 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.16 PS417_19775 chemotaxis protein CheY low > 88
Pseudomonas sp. DMC3 0.81 GFF1474 Acyl-CoA dehydrogenase 0.17 GFF2455 Protein-glutamate methylesterase/protein-glutamine glutaminase low > 89
Pseudomonas sp. RS175 0.81 PFR28_01260 Acyl-CoA dehydrogenase 0.17 PFR28_00838 Sensor histidine kinase RcsC low > 88
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_01580 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.17 AO356_03805 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_2191 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.16 Pf6N2E2_2587 Serine phosphatase RsbU, regulator of sigma subunit low > 103
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_20350 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.16 AO353_18710 chemotaxis protein CheY low > 101
Pseudomonas sp. SVBP6 0.81 COO64_RS24755 isovaleryl-CoA dehydrogenase 0.16 COO64_RS21250 fused response regulator/phosphatase low > 93
Pseudomonas aeruginosa PA14 0.81 IKLFDK_09850 isovaleryl-CoA dehydrogenase 0.16 IKLFDK_17155 two-component system response regulator HsbR low > 100
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_3987 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) 0.16 Pf1N1B4_3610 Serine phosphatase RsbU, regulator of sigma subunit low > 87
Pseudomonas sp. BP01 0.80 JOY50_RS06790 isovaleryl-CoA dehydrogenase 0.17 JOY50_RS00655 fused response regulator/phosphatase low > 84
Pseudomonas putida KT2440 0.80 PP_4064 isovaleryl-CoA dehydrogenase 0.17 PP_4363 Sensor histidine kinase/response regulator low > 96
Pseudomonas fluorescens SBW25 0.80 PFLU_RS18965 isovaleryl-CoA dehydrogenase 0.15 PFLU_RS21745 fused response regulator/phosphatase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_2470 isovaleryl-CoA dehydrogenase 0.15 Psyr_3451 Response regulator receiver:ATP-binding region, ATPase-like:Stage II sporulation E low > 86
Pseudomonas lactucae CFBP13502 0.80 GEMAOFIL_03713 Acyl-CoA dehydrogenase 0.16 GEMAOFIL_04153 Protein-glutamate methylesterase/protein-glutamine glutaminase low > 93
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_2470 isovaleryl-CoA dehydrogenase 0.15 Psyr_3451 Response regulator receiver:ATP-binding region, ATPase-like:Stage II sporulation E low > 86
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS18965 isovaleryl-CoA dehydrogenase 0.15 PFLU_RS21745 fused response regulator/phosphatase low > 109
Pseudomonas stutzeri RCH2 0.80 Psest_1084 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.15 Psest_1725 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 67
Marinobacter adhaerens HP15 0.79 HP15_1005 acyl-CoA dehydrogenase domain protein 0.14 HP15_2320 response regulator receiver protein low > 73
Dechlorosoma suillum PS 0.73 Dsui_0975 acyl-CoA dehydrogenase 0.19 Dsui_1715 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain low > 51

Not shown: 53 genomes with orthologs for SO1897 only; 1 genomes with orthologs for SO2119 only