Conservation of cofitness between SO2724 and SO1533 in Shewanella oneidensis MR-1

27 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Shewanella oneidensis MR-1	1.0	SO2724		protease, putative (NCBI ptt file)	1.0	SO1533		glycine cleavage system transcriptional activator, putative (NCBI ptt file)	0.40	1
Shewanella sp. ANA-3	0.93	Shewana3_2508		peptidase M61 domain-containing protein (RefSeq)	0.99	Shewana3_2894		DNA-binding transcriptional activator GcvA (RefSeq)	—	—
Shewanella amazonensis SB2B	0.65	Sama_1447		protease, putative (RefSeq)	0.95	Sama_2429		DNA-binding transcriptional activator GcvA (RefSeq)	low	> 62
Dechlorosoma suillum PS	0.45	Dsui_0794		putative protease with the C-terminal PDZ domain	0.28	Dsui_2033		transcriptional regulator	low	> 51
Cupriavidus basilensis FW507-4G11	0.44	RR42_RS18345		peptidase M61	0.35	RR42_RS34190		LysR family transcriptional regulator	low	> 128
Herbaspirillum seropedicae SmR1	0.44	HSERO_RS19585		peptidase M61	0.30	HSERO_RS01160		LysR family transcriptional regulator	low	> 78
Ralstonia solanacearum PSI07	0.43	RPSI07_RS10700		PDZ domain-containing protein	0.34	RPSI07_RS11375		transcriptional regulator GcvA	low	> 81
Ralstonia solanacearum GMI1000	0.43	RS_RS14480		PDZ domain-containing protein	0.36	RS_RS13815		transcriptional regulator GcvA	low	> 80
Kangiella aquimarina DSM 16071	0.43	B158DRAFT_1290		Predicted protease with the C-terminal PDZ domain	0.56	B158DRAFT_0909		Transcriptional regulator	low	> 40
Ralstonia sp. UNC404CL21Col	0.43	ABZR87_RS02180		M61 family metallopeptidase	0.35	ABZR87_RS01495		transcriptional regulator GcvA	low	> 80
Paraburkholderia sabiae LMG 24235	0.43	QEN71_RS27585		PDZ domain-containing protein	0.36	QEN71_RS01310		transcriptional regulator GcvA	low	> 153
Burkholderia phytofirmans PsJN	0.42	BPHYT_RS17425		peptidase M61	0.36	BPHYT_RS02430		XRE family transcriptional regulator	0.22	76
Ralstonia solanacearum IBSBF1503	0.42	RALBFv3_RS06530		peptidase M61	0.36	RALBFv3_RS22095		transcriptional regulator GcvA	low	> 76
Paraburkholderia graminis OAS925	0.42	ABIE53_003647		putative metalloprotease with PDZ domain	0.39	ABIE53_001336		LysR family glycine cleavage system transcriptional activator	low	> 113
Paraburkholderia bryophila 376MFSha3.1	0.42	H281DRAFT_05708		Predicted metalloprotease, contains C-terminal PDZ domain	0.34	H281DRAFT_02051		LysR family transcriptional regulator, glycine cleavage system transcriptional activator	low	> 103
Ralstonia solanacearum UW163	0.42	UW163_RS07095		peptidase M61	0.35	UW163_RS22635		transcriptional regulator GcvA	—	—
Castellaniella sp019104865 MT123	0.37	ABCV34_RS10440		PDZ domain-containing protein	0.25	ABCV34_RS01790		LysR substrate-binding domain-containing protein	low	> 48
Alteromonas macleodii MIT1002	0.36	MIT1002_01986		hypothetical protein	0.66	MIT1002_01520		Gcv operon activator	low	> 70
Acidovorax sp. GW101-3H11	0.32	Ac3H11_4005		protease, putative	0.29	Ac3H11_3		Glycine cleavage system transcriptional activator	low	> 79
Variovorax sp. OAS795	0.32	ABID97_RS24800		peptidase M61	0.33	ABID97_RS29015		transcriptional regulator GcvA	low	> 91
Acinetobacter radioresistens SK82	0.32	MPMX26_01008		hypothetical protein	0.31	MPMX26_01927		Glycine cleavage system transcriptional activator	—	—
Acinetobacter baumannii LAC-4	0.31	RR41_RS05105		M61 family metallopeptidase	0.25	RR41_RS15665		LysR family transcriptional regulator	low	> 55
Variovorax sp. SCN45	0.31	GFF2131		Putative protease	0.32	GFF4511		Transcriptional regulator, LysR family	low	> 127
Hydrogenophaga sp. GW460-11-11-14-LB1	0.31	GFF623		protease, putative	0.29	GFF4407		Glycine cleavage system transcriptional activator	low	> 90
Shewanella loihica PV-4	0.19	Shew_2752		peptidase M61 domain-containing protein (RefSeq)	0.94	Shew_2764		DNA-binding transcriptional activator GcvA (RefSeq)	—	—
Caulobacter crescentus NA1000	0.14	CCNA_02622		M61 glycyl aminopeptidase	0.40	CCNA_01174		LysR-family transcriptional regulator	low	> 66
Caulobacter crescentus NA1000 Δfur	0.14	CCNA_02622		M61 glycyl aminopeptidase	0.40	CCNA_01174		LysR-family transcriptional regulator	low	> 67
Rhodanobacter denitrificans FW104-10B01	0.07	LRK54_RS16500		peptidase M61	0.27	LRK54_RS06630		transcriptional regulator GcvA	low	> 59

Not shown: 6 genomes with orthologs for SO2724 only; 73 genomes with orthologs for SO1533 only