Conservation of cofitness between b2041 and b0436 in Escherichia coli BW25113

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2041 rfbB dTDP-glucose 4,6 dehydratase, NAD(P)-binding (NCBI) 1.0 b0436 tig trigger factor (NCBI) 0.31 10
Escherichia fergusonii Becca 0.99 EFB2_01813 dTDP-glucose 4,6-dehydratase 0.99 EFB2_03621 Trigger factor low > 86
Escherichia coli BL21 0.95 ECD_01947 dTDP-glucose 4,6 dehydratase, NAD(P)-binding 1.00 ECD_00387 peptidyl-prolyl cis/trans isomerase (trigger factor) low > 61
Escherichia coli ECOR38 0.95 HEPCGN_03105 rfbB dTDP-glucose 4,6-dehydratase 1.00 HEPCGN_06955 tig trigger factor — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF3887 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.97 GFF4352 Cell division trigger factor (EC 5.2.1.8) low > 78
Enterobacter asburiae PDN3 0.87 EX28DRAFT_0515 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.95 EX28DRAFT_2535 trigger factor — —
Enterobacter sp. TBS_079 0.86 MPMX20_03013 dTDP-glucose 4,6-dehydratase 0.95 MPMX20_01027 Trigger factor low > 85
Shewanella loihica PV-4 0.78 Shew_1401 dTDP-glucose 4,6 dehydratase (RefSeq) 0.65 Shew_2509 tig trigger factor (RefSeq) low > 60
Shewanella sp. ANA-3 0.78 Shewana3_1379 dTDP-glucose 4,6 dehydratase (RefSeq) 0.63 Shewana3_2662 tig trigger factor (RefSeq) — —
Shewanella oneidensis MR-1 0.77 SO3188 rfbB dTDP-glucose 4,6-dehydratase (NCBI ptt file) 0.63 SO1793 tig trigger factor (NCBI ptt file) low > 76
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_18980 rfbB dTDP-glucose 4 6-dehydratase 0.87 IJEDHG_16435 tig trigger factor — —
Erwinia tracheiphila SCR3 0.77 LU632_RS08850 rfbB dTDP-glucose 4,6-dehydratase 0.87 LU632_RS18350 tig trigger factor low > 74
Marinobacter adhaerens HP15 0.76 HP15_p187g47 dTDP-glucose 4,6-dehydratase 0.48 HP15_2186 trigger factor low > 73
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_343 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.50 Pf1N1B4_3944 Cell division trigger factor (EC 5.2.1.8) — —
Alteromonas macleodii MIT1002 0.75 MIT1002_03557 dTDP-glucose 4,6-dehydratase 0.60 MIT1002_02761 Trigger factor — —
Pseudomonas sp. DMC3 0.75 GFF4669 dTDP-glucose 4,6-dehydratase 0.50 GFF1442 Trigger factor — —
Shewanella amazonensis SB2B 0.65 Sama_2242 dTDP-glucose 4,6-dehydratase (RefSeq) 0.66 Sama_1223 tig trigger factor (RefSeq) — —
Ralstonia solanacearum UW163 0.63 UW163_RS00920 dTDP-glucose 4,6-dehydratase 0.35 UW163_RS14665 trigger factor — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS12645 dTDP-glucose 4,6-dehydratase 0.35 RALBFv3_RS01355 trigger factor — —
Ralstonia solanacearum PSI07 0.63 RPSI07_RS20615 dTDP-glucose 4,6-dehydratase 0.36 RPSI07_RS16120 trigger factor — —
Ralstonia solanacearum GMI1000 0.63 RS_RS03430 dTDP-glucose 4,6-dehydratase 0.36 RS_RS08640 trigger factor — —
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS04265 dTDP-glucose 4,6-dehydratase 0.39 BPHYT_RS09445 trigger factor — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_04822 dTDP-glucose 4,6-dehydratase 0.39 H281DRAFT_00895 trigger factor — —
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS25755 dTDP-glucose 4,6-dehydratase 0.40 QEN71_RS21990 trigger factor — —
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS08645 dTDP-glucose 4,6-dehydratase 0.35 ABZR87_RS12800 trigger factor low > 80
Paraburkholderia graminis OAS925 0.62 ABIE53_001137 dTDP-glucose 4,6-dehydratase 0.37 ABIE53_002114 trigger factor — —
Variovorax sp. SCN45 0.62 GFF6882 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.38 GFF490 Cell division trigger factor (EC 5.2.1.8) — —
Variovorax sp. OAS795 0.62 ABID97_RS05660 dTDP-glucose 4,6-dehydratase 0.39 ABID97_RS17605 trigger factor — —
Pseudomonas sp. BP01 0.61 JOY50_RS16040 rfbB dTDP-glucose 4,6-dehydratase 0.50 JOY50_RS25920 tig trigger factor — —
Methylophilus sp. DMC18 0.61 GFF1321 dTDP-glucose 4,6-dehydratase 0.32 GFF1302 Trigger factor — —
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS15840 spore coat protein 0.37 RR42_RS09015 trigger factor — —
Pseudomonas aeruginosa PA14 0.60 IKLFDK_27680 dTDP-glucose 4 6-dehydratase 0.51 IKLFDK_08745 trigger factor — —
Acidovorax sp. GW101-3H11 0.60 Ac3H11_1880 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.39 Ac3H11_934 Cell division trigger factor (EC 5.2.1.8) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF1837 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.39 GFF4040 Cell division trigger factor (EC 5.2.1.8) — —
Dechlorosoma suillum PS 0.58 Dsui_1948 dTDP-glucose 4,6-dehydratase 0.37 Dsui_2195 trigger factor — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS22050 spore coat protein 0.39 HSERO_RS12920 trigger factor — —
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_3099 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.26 Ga0059261_0089 trigger factor 0.71 23
Pontibacter actiniarum KMM 6156, DSM 19842 0.54 CA264_17910 dTDP-glucose 4,6-dehydratase 0.07 CA264_01415 trigger factor — —
Phocaeicola dorei CL03T12C01 0.53 ABI39_RS13370 dTDP-glucose 4,6-dehydratase 0.07 ABI39_RS02335 trigger factor low > 72
Magnetospirillum magneticum AMB-1 0.51 AMB_RS00295 dTDP-glucose 4,6-dehydratase 0.24 AMB_RS14050 trigger factor — —
Desulfovibrio vulgaris Miyazaki F 0.45 DvMF_0141 dTDP-glucose 4,6-dehydratase (RefSeq) 0.16 DvMF_0109 trigger factor (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU1364 rfbB dTDP-glucose 4,6-dehydratase (TIGR) 0.17 DVU1334 tig trigger factor (TIGR) — —

Not shown: 5 genomes with orthologs for b2041 only; 67 genomes with orthologs for b0436 only