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  • Top cofit genes for Psyr_4764 from Pseudomonas syringae pv. syringae B728a

    SAM-dependent methyltransferase
    SEED: LSU m5C1962 methyltransferase RlmI
    KEGG: ribosomal RNA large subunit methyltransferase I

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2720 Urea amidolyase-related protein 0.47 0.50
    2 Psyr_1871 Transglutaminase-like protein no 0.47
    3 Psyr_3906 regulatory protein, DeoR no 0.47
    4 Psyr_1941 ATP-binding region, ATPase-like:Histidine kinase no 0.46
    5 Psyr_2741 Beta-lactamase no 0.46
    6 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.78 0.44
    7 Psyr_2686 carbamate kinase no 0.44
    8 Psyr_1608 ice-nucleation proteins octamer repeat protein no 0.44
    9 Psyr_2117 conserved hypothetical protein no 0.44
    10 Psyr_4151 Phosphocarrier HPr protein no 0.43
    11 Psyr_0441 conserved hypothetical protein no 0.43
    12 Psyr_2952 NADP oxidoreductase, coenzyme F420-dependent no 0.42
    13 Psyr_4430 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family no 0.42
    14 Psyr_4418 Precorrin-6Y C5,15-methyltransferase (decarboxylating) no 0.42
    15 Psyr_1366 transcriptional regulator, LysR family no 0.41
    16 Psyr_2865 Hydrophobe/amphiphile efflux-1 HAE1 no 0.41
    17 Psyr_0436 Phosphopantetheine-binding protein no 0.41
    18 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.81 0.40
    19 Psyr_5038 phosphate ABC transporter ATP-binding protein, PhoT family no 0.40
    20 Psyr_4034 hypothetical protein no 0.40

    Or look for negative cofitness