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  • Top cofit genes for Psyr_4642 from Pseudomonas syringae pv. syringae B728a

    diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
    SEED: sensory box/GGDEF domain/EAL domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1263 ATPase no 0.37
    2 Psyr_4510 hypothetical protein no 0.33
    3 Psyr_4992 YD repeat protein no 0.33
    4 Psyr_2683 arginine:ornithine antiporter, APA family no 0.32
    5 Psyr_2897 regulatory protein, LuxR:Response regulator receiver 0.71 0.32
    6 Psyr_4310 hypothetical protein no 0.32
    7 Psyr_0706 Acyltransferase 3 no 0.31
    8 Psyr_4872 conserved hypothetical protein no 0.31
    9 Psyr_0337 Taurine dioxygenase no 0.31
    10 Psyr_4247 ornithine decarboxylase no 0.31
    11 Psyr_0417 gluconate permease GntT no 0.31
    12 Psyr_4444 Protein of unknown function DUF6 no 0.31
    13 Psyr_4988 YD repeat protein no 0.30
    14 Psyr_4905 conserved hypothetical protein no 0.30
    15 Psyr_2935 conserved hypothetical protein no 0.30
    16 Psyr_0655 conserved domain protein no 0.29
    17 Psyr_1065 Polysaccharide deacetylase no 0.29
    18 Psyr_0312 hypothetical protein no 0.29
    19 Psyr_4515 hypothetical protein no 0.29
    20 Psyr_0851 Protein of unknown function UPF0191 no 0.29

    Or look for negative cofitness