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  • Top cofit genes for Psyr_3585 from Pseudomonas syringae pv. syringae B728a

    Sua5/YciO/YrdC/YwlC
    SEED: Hypothetical YciO protein, TsaC/YrdC paralog
    KEGG: putative translation factor

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0492 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt no 0.45
    2 Psyr_0175 conserved hypothetical protein no 0.40
    3 Psyr_2035 conserved domain protein no 0.39
    4 Psyr_0112 hypothetical protein no 0.39
    5 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region 0.67 0.37
    6 Psyr_0310 HNH endonuclease:S-type Pyocin no 0.37
    7 Psyr_1066 PhoH-like protein 0.29 0.36
    8 Psyr_4257 Uncharacterized protein UPF0114 0.44 0.36
    9 Psyr_1666 Sporulation related protein 0.40 0.35
    10 Psyr_1788 Major facilitator superfamily 0.53 0.35
    11 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.42 0.35
    12 Psyr_3987 Iron-containing alcohol dehydrogenase 0.62 0.35
    13 Psyr_4515 hypothetical protein no 0.35
    14 Psyr_0493 CheW-like protein no 0.34
    15 Psyr_0432 conserved hypothetical protein no 0.34
    16 Psyr_2240 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer 0.49 0.34
    17 Psyr_3923 hypothetical protein no 0.34
    18 Psyr_3744 Protein of unknown function DUF214 0.24 0.34
    19 Psyr_5088 regulatory protein, LuxR:Response regulator receiver 0.31 0.33
    20 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.40 0.33

    Or look for negative cofitness