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  • Top cofit genes for Psyr_3058 from Pseudomonas syringae pv. syringae B728a

    Amidase
    SEED: putative amidase
    KEGG: aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3153 Beta-glucosidase no 0.45
    2 Psyr_4493 PAS:GGDEF no 0.39
    3 Psyr_1672 L-threonine ammonia-lyase no 0.37
    4 Psyr_2142 FecR protein no 0.37
    5 Psyr_3606 ABC transporter, substrate-binding protein, aliphatic sulfonate no 0.36
    6 Psyr_2749 Methionine--tRNA ligase no 0.36
    7 Psyr_0021 DNA protecting protein DprA no 0.36
    8 Psyr_1268 extracellular solute-binding protein, family 3:SLT no 0.35
    9 Psyr_1169 nucleoside-binding protein no 0.33
    10 Psyr_1015 Protein of unknown function DUF540 no 0.33
    11 Psyr_4477 MscS Mechanosensitive ion channel no 0.32
    12 Psyr_4316 conserved hypothetical protein no 0.32
    13 Psyr_3519 hypothetical protein no 0.32
    14 Psyr_1423 Protein of unknown function DUF159 no 0.32
    15 Psyr_2066 Protein of unknown function DUF214:Fimbrial assembly no 0.32
    16 Psyr_4666 transcriptional regulator, AsnC family 0.20 0.32
    17 Psyr_0862 Acyltransferase 3 0.40 0.32
    18 Psyr_1566 Nitroreductase no 0.31
    19 Psyr_1040 RNA polymerase sigma factor, ECF subfamily no 0.31
    20 Psyr_3072 HMG-CoA lyase-like protein no 0.31

    Or look for negative cofitness