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  • Top cofit genes for Psyr_2931 from Pseudomonas syringae pv. syringae B728a

    High-affinity nickel-transporter
    SEED: Nickel and cobalt efflux transporter rcnA
    KEGG: nickel/cobalt exporter

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1304 CheW-like protein no 0.54
    2 Psyr_1518 putative exported protein no 0.53
    3 Psyr_2960 Binding-protein-dependent transport systems inner membrane component no 0.53
    4 Psyr_1297 YaeQ no 0.52
    5 Psyr_2331 FAD-dependent pyridine nucleotide-disulfide oxidoreductase:BFD-like [2Fe-2S]-binding region no 0.51
    6 Psyr_2930 Glyoxalase/bleomycin resistance protein/dioxygenase no 0.49
    7 Psyr_2222 aminomethyltransferase no 0.49
    8 Psyr_3677 Aminotransferase, class I and II no 0.47
    9 Psyr_1250 conserved hypothetical protein no 0.47
    10 Psyr_5030 chorismate lyase 0.27 0.45
    11 Psyr_2540 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 0.52 0.44
    12 Psyr_0693 Binding-protein-dependent transport systems inner membrane component no 0.44
    13 Psyr_2907 PpiC-type peptidyl-prolyl cis-trans isomerase no 0.43
    14 Psyr_2281 GGDEF domain protein no 0.41
    15 Psyr_0906 Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer no 0.41
    16 Psyr_2799 hypothetical protein no 0.41
    17 Psyr_2243 Endoribonuclease L-PSP 0.29 0.40
    18 Psyr_3930 quinoprotein glucose dehydrogenase no 0.40
    19 Psyr_2719 transcriptional regulator, TetR family no 0.40
    20 Psyr_2813 conserved hypothetical protein no 0.40

    Or look for negative cofitness