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Gene
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Cofit
Protein
Homologs
Top cofit genes for Psyr_2605 from
Pseudomonas syringae pv. syringae B728a
transposase, putative
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3634
transcriptional regulator, TetR family
0.50
0.42
2
Psyr
_4419
Cobalamin (vitamin B12) biosynthesis CbiD protein
no
0.41
3
Psyr
_1531
replicative DNA helicase (phage and plasmid)
no
0.40
4
Psyr
_1499
Protein of unknown function DUF
no
0.37
5
Psyr
_1418
Radical SAM
no
0.37
6
Psyr
_1457
conserved hypothetical protein
no
0.36
7
Psyr
_0874
outer membrane transport energization protein ExbD
no
0.35
8
Psyr
_4656
hypothetical protein
no
0.35
9
Psyr
_0615
conserved hypothetical protein
no
0.35
10
Psyr
_1868
hypothetical protein
no
0.33
11
Psyr
_0465
HopAN1 protein
no
0.32
12
Psyr
_4336
ribosomal large subunit pseudouridine synthase E
no
0.32
13
Psyr
_3157
Aldehyde dehydrogenase
no
0.32
14
Psyr
_0845
conserved hypothetical protein
no
0.32
15
Psyr
_3523
Peptidase M20D, amidohydrolase
no
0.32
16
Psyr
_4857
conserved hypothetical protein
no
0.31
17
Psyr
_3505
Heme oxygenase
no
0.31
18
Psyr
_2602
transcriptional regulator, LuxR family
no
0.31
19
Psyr
_4869
transcriptional regulator, TetR family
no
0.31
20
Psyr
_3495
ATP-binding region, ATPase-like protein
no
0.31
Or look for
negative cofitness