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  • Top cofit genes for Psyr_2480 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LysR family
    SEED: LysR family transcriptional regulator YcjZ

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0854 conserved hypothetical protein no 0.43
    2 Psyr_1056 Poly(beta-D-mannuronate) lyase no 0.42
    3 Psyr_5011 Amino acid adenylation:Thioester reductase no 0.41
    4 Psyr_2376 MltA-interacting MipA no 0.40
    5 Psyr_1677 General substrate transporter:Major facilitator superfamily 0.47 0.38
    6 Psyr_4403 conserved hypothetical protein 0.43 0.37
    7 Psyr_0336 Outer membrane autotransporter barrel no 0.37
    8 Psyr_3141 type II and III secretion system protein:NolW-like protein 0.75 0.36
    9 Psyr_2608 Amino acid adenylation no 0.36
    10 Psyr_4508 Endo-1,4-beta-xylanase no 0.35
    11 Psyr_0167 hypothetical protein no 0.35
    12 Psyr_1515 hypothetical protein no 0.35
    13 Psyr_2397 transcriptional regulator, LysR family no 0.34
    14 Psyr_4465 conserved domain protein no 0.34
    15 Psyr_1681 Major facilitator superfamily no 0.34
    16 Psyr_4662 Amino acid adenylation no 0.34
    17 Psyr_3552 Divalent cation transporter no 0.34
    18 Psyr_1411 4-hydroxybenzoyl-CoA thioesterase 0.59 0.34
    19 Psyr_1060 Sel1-like repeat protein no 0.33
    20 Psyr_0415 N-acyl-D-amino-acid deacylase 0.15 0.33

    Or look for negative cofitness