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  • Top cofit genes for Psyr_1378 from Pseudomonas syringae pv. syringae B728a

    RecA protein
    SEED: RecA protein
    KEGG: recombination protein RecA

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2969 RND efflux system, outer membrane lipoprotein, NodT 0.52 0.42
    2 Psyr_2896 Excinuclease ABC subunit C 0.80 0.39
    3 Psyr_4520 Excinuclease ABC subunit A 0.88 0.36
    4 Psyr_4887 Peptidase S41A, C-terminal protease 0.80 0.36
    5 Psyr_0947 TPR repeat protein:TPR repeat protein 0.45 0.36
    6 Psyr_2967 Secretion protein HlyD 0.35 0.35
    7 Psyr_3469 Glycosyl transferase, family 2 no 0.35
    8 Psyr_0201 ATP-dependent DNA helicase RecG 0.98 0.35
    9 Psyr_3013 magnesium chelatase subunit ChlD no 0.35
    10 Psyr_3396 DNA replication and repair protein RecR 0.98 0.35
    11 Psyr_5065 ATP-dependent DNA helicase UvrD 0.84 0.34
    12 Psyr_3471 Flagellar basal body rod protein:Protein of unknown function DUF1078 0.45 0.34
    13 Psyr_1974 Excinuclease ABC subunit B 0.81 0.34
    14 Psyr_4681 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region 0.48 0.34
    15 Psyr_3672 cobalamin-5'-phosphate synthase 0.97 0.33
    16 Psyr_2088 2-methylaconitate cis-trans isomerase 0.46 0.33
    17 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 0.95 0.33
    18 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.35 0.32
    19 Psyr_3480 Flagellar basal-body rod protein FlgC 0.46 0.32
    20 Psyr_2913 transcriptional regulator, LysR family 0.35 0.32

    Or look for negative cofitness