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  • Top cofit genes for Psyr_1198 from Pseudomonas syringae pv. syringae B728a

    type III secretion protein HrpF
    SEED: HrpF

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1200 outer-membrane type III secretion protein HrcC no 0.76
    2 Psyr_1195 type III secretion apparatus lipoprotein, YscJ/HrcJ family no 0.74
    3 Psyr_1205 type III secretion protein HrcU no 0.74
    4 Psyr_1208 type III secretion protein HrcR no 0.73
    5 Psyr_1210 type III secretion protein HrcQa no 0.71
    6 Psyr_1213 type III secretion cytoplasmic ATPase HrcN no 0.71
    7 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE no 0.70
    8 Psyr_1215 Type III secretion protein HrcV no 0.70
    9 Psyr_1191 type III transcriptional regulator HrpS no 0.69
    10 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF no 0.68
    11 Psyr_1216 type III secretion outer membrane protein PopN no 0.67
    12 Psyr_1206 type III secretion protein HrcT no 0.67
    13 Psyr_1190 type III transcriptional regulator HrpR no 0.66
    14 Psyr_1218 type III helper protein HrpK1 no 0.64
    15 Psyr_1212 type III secretion protein HrpO no 0.64
    16 Psyr_1059 alginate export porin no 0.63
    17 Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 no 0.62
    18 Psyr_1197 type III secretion protein HrpE no 0.61
    19 Psyr_1211 type III secretion protein HrpP no 0.61
    20 Psyr_2608 Amino acid adenylation no 0.60

    Or look for negative cofitness