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  • Top cofit genes for Psyr_1057 from Pseudomonas syringae pv. syringae B728a

    alginate biosynthesis protein AlgX
    SEED: Alginate biosynthesis protein AlgX

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0219 phosphomannomutase 0.76 0.79
    2 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.64 0.78
    3 Psyr_1059 alginate export porin 0.84 0.75
    4 Psyr_1054 alginate biosynthesis protein AlgJ 0.75 0.74
    5 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.63 0.73
    6 Psyr_1063 GDP-mannose 6-dehydrogenase 0.65 0.72
    7 Psyr_1055 Membrane bound O-acyl transferase, MBOAT 0.73 0.71
    8 Psyr_1060 Sel1-like repeat protein 0.73 0.71
    9 Psyr_1058 Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis 0.84 0.70
    10 Psyr_1218 type III helper protein HrpK1 0.73 0.70
    11 Psyr_1053 alginate biosynthesis protein AlgF 0.58 0.68
    12 Psyr_1206 type III secretion protein HrcT 0.63 0.68
    13 Psyr_1200 outer-membrane type III secretion protein HrcC 0.62 0.67
    14 Psyr_1062 alginate biosynthesis protein Alg8 0.83 0.66
    15 Psyr_1205 type III secretion protein HrcU 0.74 0.66
    16 Psyr_1208 type III secretion protein HrcR 0.73 0.66
    17 Psyr_1215 Type III secretion protein HrcV no 0.66
    18 Psyr_1210 type III secretion protein HrcQa 0.54 0.66
    19 Psyr_4919 type III effector protein AvrPto1 0.68 0.66
    20 Psyr_1056 Poly(beta-D-mannuronate) lyase 0.76 0.66

    Or look for negative cofitness