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  • Top cofit genes for Psyr_0973 from Pseudomonas syringae pv. syringae B728a

    amino acid ABC transporter membrane protein, PAAT family
    SEED: Amino acid ABC transporter, permease protein
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4519 General substrate transporter:Major facilitator superfamily 0.43 0.47
    2 Psyr_3960 conserved hypothetical protein no 0.46
    3 Psyr_0964 conserved hypothetical protein no 0.44
    4 Psyr_2574 quinoprotein glucose dehydrogenase no 0.43
    5 Psyr_3727 conserved hypothetical protein no 0.41
    6 Psyr_3031 Thiolase 0.39 0.41
    7 Psyr_2567 Zinc-containing alcohol dehydrogenase superfamily no 0.41
    8 Psyr_0956 Cyclopropane-fatty-acyl-phospholipid synthase 0.27 0.39
    9 Psyr_0723 Sensor protein PilS no 0.39
    10 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein no 0.39
    11 Psyr_2869 xenobiotic compound monooxygenase, DszA family no 0.39
    12 Psyr_1792 Amino acid adenylation no 0.39
    13 Psyr_1017 type III effector HopJ1 0.21 0.38
    14 Psyr_1175 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal no 0.38
    15 Psyr_2330 FAD dependent oxidoreductase no 0.38
    16 Psyr_4564 Biotin--acetyl-CoA-carboxylase ligase no 0.37
    17 Psyr_2978 PAS 0.40 0.37
    18 Psyr_1868 hypothetical protein no 0.37
    19 Psyr_0835 transcriptional regulator, TraR/DksA family 0.43 0.37
    20 Psyr_3527 glutathione-independent formaldehyde dehydrogenase no 0.37

    Or look for negative cofitness