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  • Top cofit genes for Psyr_0516 from Pseudomonas syringae pv. syringae B728a

    ATP-dependent RNA helicase DbpA
    SEED: ATP-dependent 23S rRNA helicase DbpA
    KEGG: ATP-independent RNA helicase DbpA

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4801 Outer membrane efflux protein no 0.56
    2 Psyr_2834 hypothetical protein no 0.52
    3 Psyr_3121 Protein of unknown function DUF1345 no 0.51
    4 Psyr_1916 Peptidase S24, S26A and S26B no 0.50
    5 Psyr_3790 conserved hypothetical protein no 0.48
    6 Psyr_0252 adenylate cyclase 0.30 0.48
    7 Psyr_1250 conserved hypothetical protein no 0.47
    8 Psyr_2296 Aldo/keto reductase 0.25 0.47
    9 Psyr_3106 phosphate ABC transporter substrate-binding protein, PhoT family no 0.47
    10 Psyr_3346 conserved hypothetical protein no 0.46
    11 Psyr_2243 Endoribonuclease L-PSP no 0.46
    12 Psyr_2783 conserved hypothetical protein no 0.46
    13 Psyr_3867 hypothetical protein no 0.46
    14 Psyr_2481 thiol peroxidase (atypical 2-Cys peroxiredoxin) no 0.46
    15 Psyr_2714 putative transmembrane protein no 0.45
    16 Psyr_2486 diguanylate cyclase/phosphodiesterase 0.37 0.45
    17 Psyr_0357 Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein 0.48 0.45
    18 Psyr_3687 Protein of unknown function UPF0118 no 0.45
    19 Psyr_3859 Purine nucleoside permease no 0.45
    20 Psyr_2877 monosaccharide ABC transporter substrate-binding protein, CUT2 family no 0.45

    Or look for negative cofitness