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  • Top cofit genes for Psyr_0035 from Pseudomonas syringae pv. syringae B728a

    regulatory protein, LysR:LysR, substrate-binding protein
    SEED: D-serine dehydratase transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1581 conserved hypothetical protein no 0.37
    2 Psyr_1755 ABC transporter no 0.36
    3 Psyr_3196 isocitrate lyase 0.19 0.33
    4 Psyr_2571 monosaccharide ABC transporter ATP-binding protein, CUT2 family no 0.32
    5 Psyr_2681 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 no 0.32
    6 Psyr_2541 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal no 0.31
    7 Psyr_3829 Leucine-rich repeat protein no 0.31
    8 Psyr_5111 dTDP-glucose 4,6-dehydratase no 0.30
    9 Psyr_4449 AsmA no 0.30
    10 Psyr_2213 transcriptional regulator, AraC family no 0.30
    11 Psyr_1941 ATP-binding region, ATPase-like:Histidine kinase no 0.30
    12 Psyr_3097 Peptidase U32 0.19 0.29
    13 Psyr_0429 membrane protein, putative no 0.29
    14 Psyr_2102 Nitrate transporter 0.27 0.29
    15 Psyr_4275 DNA replication and repair protein RadA no 0.29
    16 Psyr_4289 Protein of unknown function Zinc binding 2 0.70 0.28
    17 Psyr_1168 nucleoside ABC transporter membrane protein 0.40 0.28
    18 Psyr_0690 3-hydroxyisobutyrate dehydrogenase no 0.28
    19 Psyr_3503 conserved hypothetical protein no 0.28
    20 Psyr_4294 Histone deacetylase family protein no 0.27

    Or look for negative cofitness