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  • Top cofit genes for Pf6N2E2_6130 from Pseudomonas fluorescens FW300-N2E2

    5S RNA

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_3077 FIG138056: a glutathione-dependent thiol reductase no 0.28
    2 Pf6N2E2_3125 Transcriptional regulators, LysR family no 0.25
    3 Pf6N2E2_3009 Phage tail tube protein no 0.25
    4 Pf6N2E2_927 (AJ250023) putative polyketide synthase no 0.25
    5 Pf6N2E2_234 FIG00454312: hypothetical protein no 0.23
    6 Pf6N2E2_4062 hypothetical protein no 0.23
    7 Pf6N2E2_1969 Major facilitator superfamily MFS_1 no 0.22
    8 Pf6N2E2_2371 Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) no 0.22
    9 Pf6N2E2_4140 Sodium-dependent phosphate transporter no 0.21
    10 Pf6N2E2_3017 hypothetical protein no 0.21
    11 Pf6N2E2_648 General secretion pathway protein K no 0.21
    12 Pf6N2E2_5068 putative Cytochrome bd2, subunit I no 0.21
    13 Pf6N2E2_2999 probable tail fiber assembly protein no 0.21
    14 Pf6N2E2_5069 putative Cytochrome bd2, subunit II no 0.21
    15 Pf6N2E2_384 Glycine cleavage system transcriptional activator no 0.21
    16 Pf6N2E2_2402 hypothetical protein no 0.21
    17 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX no 0.20
    18 Pf6N2E2_1495 Glutamate transport membrane-spanning protein no 0.20
    19 Pf6N2E2_2932 Short chain dehydrogenase no 0.20
    20 Pf6N2E2_4627 Malonate transporter, MadM subunit no 0.20

    Or look for negative cofitness