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Cofit
Top cofit genes for Pf6N2E2_6130 from
Pseudomonas fluorescens FW300-N2E2
5S RNA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_3077
FIG138056: a glutathione-dependent thiol reductase
no
0.28
2
Pf6N2E2
_3125
Transcriptional regulators, LysR family
no
0.25
3
Pf6N2E2
_3009
Phage tail tube protein
no
0.25
4
Pf6N2E2
_927
(AJ250023) putative polyketide synthase
no
0.25
5
Pf6N2E2
_234
FIG00454312: hypothetical protein
no
0.23
6
Pf6N2E2
_4062
hypothetical protein
no
0.23
7
Pf6N2E2
_1969
Major facilitator superfamily MFS_1
no
0.22
8
Pf6N2E2
_2371
Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE)
no
0.22
9
Pf6N2E2
_4140
Sodium-dependent phosphate transporter
no
0.21
10
Pf6N2E2
_3017
hypothetical protein
no
0.21
11
Pf6N2E2
_648
General secretion pathway protein K
no
0.21
12
Pf6N2E2
_5068
putative Cytochrome bd2, subunit I
no
0.21
13
Pf6N2E2
_2999
probable tail fiber assembly protein
no
0.21
14
Pf6N2E2
_5069
putative Cytochrome bd2, subunit II
no
0.21
15
Pf6N2E2
_384
Glycine cleavage system transcriptional activator
no
0.21
16
Pf6N2E2
_2402
hypothetical protein
no
0.21
17
Pf6N2E2
_3847
FIG001341: Probable Fe(2+)-trafficking protein YggX
no
0.20
18
Pf6N2E2
_1495
Glutamate transport membrane-spanning protein
no
0.20
19
Pf6N2E2
_2932
Short chain dehydrogenase
no
0.20
20
Pf6N2E2
_4627
Malonate transporter, MadM subunit
no
0.20
Or look for
negative cofitness