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Protein
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Top cofit genes for Pf6N2E2_5608 from
Pseudomonas fluorescens FW300-N2E2
PAP2 superfamily protein
SEED: PAP2 superfamily protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_4340
Outer membrane protein ImpK/VasF, OmpA/MotB domain
no
0.34
2
Pf6N2E2
_4520
hypothetical protein
no
0.33
3
Pf6N2E2
_443
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
no
0.31
4
Pf6N2E2
_994
NADH-dependent dehydrogenase
no
0.31
5
Pf6N2E2
_4343
Phosphoprotein phosphatase PppA
no
0.30
6
Pf6N2E2
_3645
Type I secretion outer membrane protein, TolC precursor
no
0.29
7
Pf6N2E2
_5686
glutamine synthetase family protein
no
0.29
8
Pf6N2E2
_5325
Transcriptional regulator, LysR family
no
0.28
9
Pf6N2E2
_4269
cytosolic long-chain acyl-CoA thioester hydrolase family protein
no
0.28
10
Pf6N2E2
_1464
hypothetical protein
no
0.28
11
Pf6N2E2
_4031
Biofilm PGA outer membrane secretin PgaA
no
0.28
12
Pf6N2E2
_3217
Hemolysin activation/secretion protein
no
0.27
13
Pf6N2E2
_2235
Xanthine permease
no
0.27
14
Pf6N2E2
_4900
Inner membrane protein YbhQ
0.57
0.27
15
Pf6N2E2
_163
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
no
0.27
16
Pf6N2E2
_5801
FIG137887: membrane protein related to purine degradation
0.24
0.27
17
Pf6N2E2
_4295
hypothetical protein
no
0.27
18
Pf6N2E2
_3428
hypothetical protein
no
0.27
19
Pf6N2E2
_5802
Ureidoglycolate hydrolase (EC 3.5.3.19)
0.61
0.26
20
Pf6N2E2
_1028
Transcriptional regulator, LysR family
0.54
0.26
Or look for
negative cofitness