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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_4315 from
Pseudomonas fluorescens FW300-N2E2
Rhs-family protein
SEED: Rhs-family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_4344
Serine/threonine protein kinase (EC 2.7.11.1) PpkA
0.49
0.55
2
Pf6N2E2
_2057
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes
no
0.52
3
Pf6N2E2
_4334
Uncharacterized protein ImpC
0.82
0.49
4
Pf6N2E2
_4341
IcmF-related protein
0.88
0.49
5
Pf6N2E2
_4328
Uncharacterized protein ImpH/VasB
0.73
0.48
6
Pf6N2E2
_4347
FIG00957151: hypothetical protein
0.13
0.48
7
Pf6N2E2
_4336
Uncharacterized protein ImpA
0.81
0.48
8
Pf6N2E2
_4339
Uncharacterized protein ImpJ/VasE
0.82
0.42
9
Pf6N2E2
_4329
Protein ImpG/VasA
0.73
0.42
10
Pf6N2E2
_4318
VgrG-3 protein
0.32
0.42
11
Pf6N2E2
_4348
Autotransporter adhesin
0.39
0.41
12
Pf6N2E2
_4337
Uncharacterized protein ImpI/VasC
0.49
0.40
13
Pf6N2E2
_4333
Uncharacterized protein ImpD
0.84
0.38
14
Pf6N2E2
_4327
ClpB protein
0.79
0.37
15
Pf6N2E2
_4335
Uncharacterized protein ImpB
0.63
0.33
16
Pf6N2E2
_2406
Periplasmic binding protein
no
0.29
17
Pf6N2E2
_4030
Biofilm PGA synthesis deacetylase PgaB (EC 3.-)
no
0.29
18
Pf6N2E2
_5559
Glycine cleavage system H protein
0.41
0.28
19
Pf6N2E2
_3983
Membrane bound c-di-GMP receptor LapD
0.68
0.26
20
Pf6N2E2
_4340
Outer membrane protein ImpK/VasF, OmpA/MotB domain
0.79
0.26
Or look for
negative cofitness