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  • Top cofit genes for Pf6N2E2_4252 from Pseudomonas fluorescens FW300-N2E2

    Membrane protease subunits, stomatin/prohibitin homologs
    SEED: Membrane protease subunits, stomatin/prohibitin homologs

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_221 RND efflux system, membrane fusion protein CmeA no 0.27
    2 Pf6N2E2_5916 Flp pilus assembly protein TadB no 0.25
    3 Pf6N2E2_5024 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) 0.78 0.24
    4 Pf6N2E2_4753 Glycine cleavage system transcriptional antiactivator GcvR no 0.24
    5 Pf6N2E2_5839 Glyoxylate carboligase (EC 4.1.1.47) no 0.24
    6 Pf6N2E2_1763 Cyclohexanone monooxygenase (EC 1.14.13.22) no 0.24
    7 Pf6N2E2_3413 Fe2+-dicitrate sensor, membrane component no 0.24
    8 Pf6N2E2_4604 FIG00955003: hypothetical protein no 0.23
    9 Pf6N2E2_1794 FIG00553873: hypothetical protein no 0.23
    10 Pf6N2E2_391 hypothetical protein no 0.23
    11 Pf6N2E2_5253 Additional periplasmic component NikK of nickel ECF transporter no 0.23
    12 Pf6N2E2_1203 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16) no 0.23
    13 Pf6N2E2_2305 Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) no 0.23
    14 Pf6N2E2_953 FIG00958851: hypothetical protein no 0.22
    15 Pf6N2E2_1857 hypothetical protein no 0.22
    16 Pf6N2E2_4523 Esterase A no 0.22
    17 Pf6N2E2_939 hypothetical protein no 0.22
    18 Pf6N2E2_2763 Predicted signal transduction protein no 0.22
    19 Pf6N2E2_1526 MgtC family no 0.21
    20 Pf6N2E2_4754 Protein rarD no 0.21

    Or look for negative cofitness