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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_4032 from
Pseudomonas fluorescens FW300-N2E2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_4031
Biofilm PGA outer membrane secretin PgaA
no
0.74
2
Pf6N2E2
_4193
Signal transduction histidine kinase
no
0.70
3
Pf6N2E2
_4030
Biofilm PGA synthesis deacetylase PgaB (EC 3.-)
no
0.70
4
Pf6N2E2
_4194
Two-component response regulator
no
0.67
5
Pf6N2E2
_4028
Biofilm PGA synthesis auxiliary protein PgaD
no
0.65
6
Pf6N2E2
_3456
Inner membrane protein YfiN
no
0.58
7
Pf6N2E2
_4029
Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-)
no
0.54
8
Pf6N2E2
_5491
FOG: GGDEF domain
no
0.47
9
Pf6N2E2
_2587
Serine phosphatase RsbU, regulator of sigma subunit
no
0.44
10
Pf6N2E2
_3978
Type I secretion system, membrane fusion protein LapC
no
0.41
11
Pf6N2E2
_3979
Type I secretion system ATPase, LssB family LapB
no
0.40
12
Pf6N2E2
_3457
Uncharacterized protein YfiR precursor
no
0.40
13
Pf6N2E2
_3981
T1SS secreted agglutinin RTX
no
0.39
14
Pf6N2E2
_604
Membrane alanine aminopeptidase N (EC 3.4.11.2)
no
0.38
15
Pf6N2E2
_3980
Type I secretion system, outer membrane component LapE
no
0.36
16
Pf6N2E2
_4341
IcmF-related protein
no
0.36
17
Pf6N2E2
_4011
Sensory box/GGDEF family protein
no
0.36
18
Pf6N2E2
_4337
Uncharacterized protein ImpI/VasC
no
0.33
19
Pf6N2E2
_4033
GTP-binding protein
no
0.33
20
Pf6N2E2
_3983
Membrane bound c-di-GMP receptor LapD
no
0.32
Or look for
negative cofitness