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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_249 from
Pseudomonas fluorescens FW300-N2E2
Pirin
SEED: Pirin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_4684
hypothetical protein
no
0.29
2
Pf6N2E2
_4683
L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)
0.54
0.26
3
Pf6N2E2
_6003
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
0.21
0.26
4
Pf6N2E2
_4723
Threonine dehydrogenase and related Zn-dependent dehydrogenases
no
0.25
5
Pf6N2E2
_2561
FIG00955434: hypothetical protein
no
0.25
6
Pf6N2E2
_4667
COG1451: Predicted metal-dependent hydrolase
0.71
0.24
7
Pf6N2E2
_1090
Transcriptional regulator for ferulate or vanillate catabolism
no
0.23
8
Pf6N2E2
_2139
Paraquat-inducible protein A
0.28
0.22
9
Pf6N2E2
_3203
4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
no
0.22
10
Pf6N2E2
_3874
Thioredoxin-like protein clustered with PA0057
no
0.22
11
Pf6N2E2
_5087
Transcription elongation factor GreB-related protein
0.45
0.22
12
Pf6N2E2
_3637
yqiA-like hydrolase, affects the cell envelope
(from data)
no
0.22
13
Pf6N2E2
_2057
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes
no
0.22
14
Pf6N2E2
_796
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
no
0.22
15
Pf6N2E2
_799
hypothetical protein
no
0.21
16
Pf6N2E2
_5345
LppC putative lipoprotein
no
0.21
17
Pf6N2E2
_3334
Ornithine decarboxylase (EC 4.1.1.17) / Arginine decarboxylase (EC 4.1.1.19)
0.36
0.21
18
Pf6N2E2
_5096
FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8)
no
0.21
19
Pf6N2E2
_390
hypothetical protein
no
0.21
20
Pf6N2E2
_3816
Glycogen phosphorylase (EC 2.4.1.1)
0.39
0.21
Or look for
negative cofitness