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  • Top cofit genes for Pf1N1B4_1428 from Pseudomonas fluorescens FW300-N1B4

    Flagellar motor rotation protein MotB
    SEED: Flagellar motor rotation protein MotB
    KEGG: chemotaxis protein MotB

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf1N1B4_2749 Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) no 0.41
    2 Pf1N1B4_2068 Uncharacterized protein ImpJ/VasE 0.54 0.38
    3 Pf1N1B4_1759 Fibronectin type III domain protein no 0.37
    4 Pf1N1B4_3574 Flagellar hook-associated protein FlgL 0.93 0.37
    5 Pf1N1B4_3575 O-antigen biosynthesis protein 0.73 0.35
    6 Pf1N1B4_2633 Putative drug efflux protein no 0.34
    7 Pf1N1B4_4721 Nuclease inhibitor no 0.34
    8 Pf1N1B4_4408 two-component response regulator no 0.33
    9 Pf1N1B4_805 hypothetical protein no 0.32
    10 Pf1N1B4_1523 hypothetical protein no 0.32
    11 Pf1N1B4_3488 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.32
    12 Pf1N1B4_2671 Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7) no 0.31
    13 Pf1N1B4_3931 Auxin-binding protein, putative no 0.30
    14 Pf1N1B4_3258 FIG00953409: hypothetical protein no 0.30
    15 Pf1N1B4_2482 Putative phosphatase no 0.30
    16 Pf1N1B4_5353 hypothetical protein no 0.30
    17 Pf1N1B4_3210 Uncharacterized protein conserved in bacteria, NMA0228-like 0.38 0.30
    18 Pf1N1B4_764 Uncharacterized isomerase yddE, PhzC-PhzF family no 0.29
    19 Pf1N1B4_4915 Outer membrane porin, OprD family no 0.29
    20 Pf1N1B4_2035 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) 0.84 0.29

    Or look for negative cofitness