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  • Top cofit genes for PFLU_RS19025 from Pseudomonas fluorescens SBW25-INTG

    fimbrial biogenesis outer membrane usher protein
    SEED: Sigma-fimbriae usher protein
    KEGG: outer membrane usher protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PFLU_RS19020 fimbrial major subunit CsuA/B family protein 0.75 0.37
    2 PFLU_RS19035 spore coat protein U domain-containing protein 0.61 0.34
    3 PFLU_RS10320 class I SAM-dependent methyltransferase no 0.33
    4 PFLU_RS19030 molecular chaperone 0.88 0.28
    5 PFLU_RS10300 transaldolase no 0.27
    6 PFLU_RS20485 FAD-binding oxidoreductase no 0.27
    7 PFLU_RS09195 acyl-CoA dehydrogenase no 0.27
    8 PFLU_RS17330 PAS domain-containing sensor histidine kinase no 0.23
    9 PFLU_RS25130 GAF domain-containing protein no 0.21
    10 PFLU_RS00555 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha no 0.20
    11 PFLU_RS12735 diguanylate cyclase no 0.20
    12 PFLU_RS04630 OmpA family lipoprotein no 0.20
    13 PFLU_RS28915 glycine cleavage system aminomethyltransferase GcvT 0.52 0.20
    14 PFLU_RS16780 glycine betaine/L-proline transporter ProP no 0.20
    15 PFLU_RS19040 spore coat protein U domain-containing protein 0.57 0.20
    16 PFLU_RS30535 DUF2897 family protein no 0.20
    17 PFLU_RS00550 NAD(P) transhydrogenase subunit alpha no 0.20
    18 PFLU_RS23015 TetR/AcrR family transcriptional regulator no 0.19
    19 PFLU_RS28415 tRNA (guanosine(46)-N7)-methyltransferase TrmB no 0.19
    20 PFLU_RS04060 glycine betaine ABC transporter substrate-binding protein no 0.19

    Or look for negative cofitness