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  • Top cofit genes for LU632_RS21115 from Erwinia tracheiphila SCR3

    yhbY: ribosome assembly RNA-binding protein YhbY
    SEED: FIG004454: RNA binding protein
    KEGG: RNA-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 LU632_RS23310 gltP glutamate/aspartate:proton symporter GltP 0.82 0.51
    2 LU632_RS11195 C40 family peptidase no 0.49
    3 LU632_RS15620 DUF5347 domain-containing protein no 0.47
    4 LU632_RS14580 hflD high frequency lysogenization protein HflD 0.57 0.46
    5 LU632_RS17465 mepS bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase 0.71 0.46
    6 LU632_RS17565 extracellular solute-binding protein 0.31 0.46
    7 LU632_RS01155 pepD beta-Ala-His dipeptidase 0.77 0.45
    8 LU632_RS21420 tldD metalloprotease TldD 0.67 0.45
    9 LU632_RS03300 carbohydrate porin no 0.45
    10 LU632_RS06125 AAA family ATPase no 0.45
    11 LU632_RS16250 nagA N-acetylglucosamine-6-phosphate deacetylase 0.66 0.45
    12 LU632_RS03000 mutT 8-oxo-dGTP diphosphatase MutT no 0.44
    13 LU632_RS14455 phage N-6-adenine-methyltransferase no 0.44
    14 LU632_RS15130 hypothetical protein no 0.43
    15 LU632_RS03995 hypothetical protein no 0.42
    16 LU632_RS13120 minD septum site-determining protein MinD 0.52 0.42
    17 LU632_RS05245 umuC translesion error-prone DNA polymerase V subunit UmuC no 0.42
    18 LU632_RS20020 chloride channel protein no 0.42
    19 LU632_RS19275 ftsE cell division ATP-binding protein FtsE 0.18 0.41
    20 LU632_RS17990 yfhb phosphatidylglycerophosphatase C no 0.41

    Or look for negative cofitness