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  • Top cofit genes for LU632_RS00015 from Erwinia tracheiphila SCR3

    recF: DNA replication/repair protein RecF
    SEED: DNA recombination and repair protein RecF
    KEGG: DNA replication and repair protein RecF

    Rank Hit Name Description Conserved? Cofitness  
    1 LU632_RS17205 Arc family DNA-binding protein no 0.66
    2 LU632_RS12190 recombinase family protein no 0.55
    3 LU632_RS19790 transposase family protein no 0.53
    4 LU632_RS09855 hypothetical protein no 0.49
    5 LU632_RS00245 eptB 'kdo(2)-lipid A phosphoethanolamine 7''-transferase' pseudo=_no_value transl_table=11 no 0.49
    6 LU632_RS11290 GMC family oxidoreductase N-terminal domain-containing protein no 0.47
    7 LU632_RS15015 glycoside hydrolase family protein 0.31 0.47
    8 LU632_RS19685 rraA ribonuclease E activity regulator RraA no 0.46
    9 LU632_RS01180 hypothetical protein no 0.46
    10 LU632_RS19145 AvrPphF family type III effector no 0.46
    11 LU632_RS10860 metal-dependent hydrolase 0.45 0.45
    12 LU632_RS23190 IS6 family transposase no 0.45
    13 LU632_RS10020 TfoX/Sxy family DNA transformation protein 0.31 0.45
    14 LU632_RS18875 IS256 family transposase no 0.44
    15 LU632_RS21490 YhdT family protein no 0.44
    16 LU632_RS09340 idi isopentenyl-diphosphate Delta-isomerase no 0.44
    17 LU632_RS11180 Bcr/CflA family multidrug efflux MFS transporter 0.62 0.43
    18 LU632_RS24490 hypothetical protein no 0.43
    19 LU632_RS25335 hypothetical protein no 0.43
    20 LU632_RS03570 phage major capsid protein, P2 family no 0.43

    Or look for negative cofitness