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  • Top cofit genes for GFF5781 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3258 hypothetical protein no 0.62
    2 GFF6525 hypothetical protein no 0.57
    3 GFF5572 FIG00984604: hypothetical protein no 0.56
    4 GFF4937 no description no 0.55
    5 GFF285 no description no 0.54
    6 GFF6957 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) no 0.53
    7 GFF1040 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.50
    8 GFF2835 putative TonB-dependent receptor no 0.50
    9 GFF2836 MotA/TolQ/ExbB proton channel family protein no 0.50
    10 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 no 0.50
    11 GFF2734 DNA topoisomerase IV subunit B (EC 5.99.1.3) no 0.49
    12 GFF4242 TRAP-type C4-dicarboxylate transport system, periplasmic component no 0.49
    13 GFF6067 Permease of the drug/metabolite transporter (DMT) superfamily no 0.49
    14 GFF3980 3-phenylpropionate dioxygenase beta subunit (EC 1.14.1.-) no 0.49
    15 GFF6562 T1SS secreted agglutinin RTX no 0.48
    16 GFF1823 Mg(2+)-transport-ATPase-associated protein MgtC no 0.48
    17 GFF6294 Cell division protein no 0.48
    18 GFF489 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) no 0.47
    19 GFF6219 hypothetical protein no 0.47
    20 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.47

    Or look for negative cofitness