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  • Top cofit genes for GFF4290 from Sphingobium sp. HT1-2

    Error-prone repair protein UmuD
    SEED: Error-prone repair protein UmuD
    KEGG: DNA polymerase V

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF802 Sulfate permease, Trk-type no 0.71
    2 GFF4784 Rrf2 family transcriptional regulator, group III 0.26 0.69
    3 GFF349 Capsule polysaccharide export protein no 0.68
    4 GFF348 Capsular polysaccharide export system protein KpsS no 0.68
    5 GFF3638 putative cytochrome P450 hydroxylase no 0.67
    6 GFF3265 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.66
    7 GFF365 hypothetical protein no 0.66
    8 GFF2319 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like 0.30 0.64
    9 GFF951 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) no 0.64
    10 GFF4565 hypothetical protein no 0.63
    11 GFF1667 hypothetical protein no 0.62
    12 GFF4005 hypothetical protein no 0.62
    13 GFF4220 Mannose-1-phosphate guanylyltransferase (EC 2.7.7.13) no 0.60
    14 GFF4126 ABC transporter involved in resistance to organic solvents, substrate-binding protein 2 no 0.59
    15 GFF2445 GGDEF domain protein no 0.59
    16 GFF5126 L-sorbosone dehydrogenase no 0.59
    17 GFF5201 sigma-24 (FecI-like) protein no 0.59
    18 GFF306 DedA no 0.58
    19 GFF4033 hypothetical protein no 0.58
    20 GFF2831 Alpha-glucosidase (EC 3.2.1.20) no 0.57

    Or look for negative cofitness