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  • Top cofit genes for BPHYT_RS05220 from Burkholderia phytofirmans PsJN

    S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB
    SEED: SAM-dependent methyltransferase YafE (UbiE paralog)

    Rank Hit Name Description Conserved? Cofitness  
    1 BPHYT_RS34770 chemotaxis protein no 0.32
    2 BPHYT_RS18385 4-hydroxyphenylpyruvate dioxygenase no 0.31
    3 BPHYT_RS01750 von Willebrand factor A 0.31 0.31
    4 BPHYT_RS31120 pseudouridine-5'-phosphate glycosidase no 0.30
    5 BPHYT_RS35290 hypothetical protein no 0.27
    6 BPHYT_RS20010 membrane protein no 0.27
    7 BPHYT_RS34665 hypothetical protein no 0.27
    8 BPHYT_RS28145 diguanylate cyclase no 0.26
    9 BPHYT_RS00180 ligand-gated channel protein no 0.26
    10 BPHYT_RS32730 histidine phosphatase no 0.26
    11 BPHYT_RS01765 carbon-monoxide dehydrogenase no 0.26
    12 BPHYT_RS09835 uroporphyrin-III C-methyltransferase no 0.26
    13 BPHYT_RS10790 C4-dicarboxylate ABC transporter substrate-binding protein no 0.26
    14 BPHYT_RS25525 hypothetical protein no 0.25
    15 BPHYT_RS13690 short-chain dehydrogenase no 0.25
    16 BPHYT_RS18360 amino acid transporter no 0.25
    17 BPHYT_RS00830 DNA primase no 0.25
    18 BPHYT_RS21205 high-affinity nickel-transporter no 0.24
    19 BPHYT_RS23230 histidine kinase no 0.24
    20 BPHYT_RS19725 arabinose ABC transporter permease no 0.24

    Or look for negative cofitness