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  • Top cofit genes for b1787 from Escherichia coli BW25113

    yeaK: hypothetical protein (NCBI)
    SEED: Uncharacterized protein YeaK

    Rank Hit Name Description Conserved? Cofitness  
    1 b2809 b2809 orf, hypothetical protein (VIMSS) no 0.21
    2 b2335 yfcR predicted fimbrial-like adhesin protein (NCBI) no 0.20
    3 b1960 vsr DNA mismatch endonuclease of very short patch repair (NCBI) 0.51 0.20
    4 b4568 ytjA predicted protein (RefSeq) no 0.20
    5 b2919 ygfG putative enzyme (VIMSS) 0.43 0.19
    6 b1127 pepT peptidase T (NCBI) no 0.19
    7 b3898 frvX predicted endo-1,4-beta-glucanase (NCBI) no 0.19
    8 b2513 yfgM hypothetical protein (NCBI) no 0.19
    9 b1824 yobF hypothetical protein (NCBI) no 0.19
    10 b4478 dgoD galactonate dehydratase (NCBI) no 0.19
    11 b1338 ydaJ putative aminohydrolase (EC 3.5.1.14) (VIMSS) no 0.19
    12 b0392 ykiA hypothetical protein (NCBI) no 0.19
    13 b4701 sokX sok-related sRNA, function unknown (RefSeq) no 0.19
    14 b0441 ppiD peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) no 0.19
    15 b2356 yfdM orf, hypothetical protein (VIMSS) no 0.19
    16 b2676 nrdF ribonucleotide-diphosphate reductase beta subunit (NCBI) no 0.18
    17 b3896 yiiG hypothetical protein (NCBI) 0.42 0.18
    18 b4661 yfcU no description no 0.18
    19 b4028 yjbG hypothetical protein (NCBI) no 0.18
    20 b3568 xylH D-xylose transporter subunit (NCBI) no 0.18

    Or look for negative cofitness